KEGG   Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B4063
Entry
SeAg_B4063        CDS       T00751                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sea  Salmonella enterica subsp. enterica serovar Agona SL483
Brite
KEGG Orthology (KO) [BR:sea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sea03032]
    SeAg_B4063 (gyrB)
   03400 DNA repair and recombination proteins [BR:sea03400]
    SeAg_B4063 (gyrB)
Enzymes [BR:sea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SeAg_B4063 (gyrB)
DNA replication proteins [BR:sea03032]
 Prokaryotic type
  DNA Topoisomerases
   SeAg_B4063 (gyrB)
DNA repair and recombination proteins [BR:sea03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SeAg_B4063 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C GyrB_hook Toprim HATPase_c HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: ACH51821
UniProt: B5EYB1
Position
complement(3959549..3961963)
AA seq 804 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLF
EPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVNSFE
QALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagatatcgtc
gtgactattcacgccgataactccgtgtccgtaacggatgatggccgtggcattccgacc
ggtattcacccggaagaaggcgtctcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaatttgacgataactcctataaagtctccggcggtctgcacggcgtgggcgtc
tcggtagtcaacgctctgtcgcaaaaactggaactggttatccagcgagatggcaaaatt
caccgtcagatctacgagcacggcgtgccgcaggcacccctggccgtcactggcgatacc
gataaaaccggcacgatggtacgtttctggccgagccacgaaaccttcaccaacgtcact
gaatttgaatatgagatcctggcgaaacgcctgcgtgaactgtcattcctgaactcaggc
gtctccatccgcctgcgcgacaagcgcgatggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctcaacaagaataaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtatcggtgtggaagtagcgctacagtggaacgac
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtacc
cacctggcaggcttccgtgcggcgatgacccgtacgctgaacgcctacatggacaaagaa
ggctacagcaaaaaagctaaagtcagcgccaccggcgatgatgcccgtgaaggtctgatt
gcggtggtttccgtgaaggtgccggacccgaaattctcctcgcagaccaaagataagctg
gtctcttccgaggtgaaatcggcggtagaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatctgacgcgaaaatcgtcgtcggcaaaattatcgacgccgcgcgt
gcgcgtgaagcggcgcgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctggattta
gccggtctgccgggcaaactggcggactgccaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgcgaagcagggccgtaaccgcaagaac
caggcgattctgccgctgaaaggtaaaatcctcaacgtcgagaaagcgcgcttcgacaag
atgctctcctctcaggaagtggcgacgctgattaccgcgctgggctgcggtatcggtcgc
gacgagtacaacccggacaagctgcgttatcatagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgtcgagcgcggccacgtctacattgcccagccgccgctgtacaaagtgaagaaaggc
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatttccatcgcg
cttgacggtgcgactctgcacgcgaacgctcatgcgccggcgctatccggcgaagcgtta
gaaaaactggtctctgaatataacgccacgcagaaaatgattggtcgtatggagcgtcgc
ttcccgaaagcgctgctcaaagagctggtgtatcagccaactctgaccgaagccgatctt
tctgatgagcagactgtaacgcgctgggtgaatgcgctgattaccgagctgaacgagaaa
gagcagcacggcagtcagtggaagttcgatgttcatactaatacggaacagaatctgttc
gagcctatcgttcgcgtgcgtacgcatggtgtggataccgattatccgttggatcacgag
tttgtgaccggcgcggaatatcgtcgtatctgcacgctgggcgagaagctgcgcggtctg
attgaagaggacgcgttcatcgaacgcggcgagcgtcgccagccggtaaacagcttcgag
caggcgctggagtggctggtgaaagaatcacgtcgcggtctggctatccagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgtgtgaccgtcaaagatgcgattgctgccgaccagctgttcaccacgctg
atgggtgatgccgttgagccgcgtcgtgcctttatcgaagagaacgccctgaaagcagcg
aatatcgatatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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