KEGG   Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B4639
Entry
SeAg_B4639        CDS       T00751                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
sea  Salmonella enterica subsp. enterica serovar Agona SL483
Pathway
sea02024  Quorum sensing
sea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SeAg_B4639 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SeAg_B4639 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sea03019]
    SeAg_B4639 (hfq)
   03036 Chromosome and associated proteins [BR:sea03036]
    SeAg_B4639 (hfq)
Messenger RNA biogenesis [BR:sea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SeAg_B4639 (hfq)
Chromosome and associated proteins [BR:sea03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SeAg_B4639 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ACH51977
UniProt: B5F387
Position
4537241..4537549
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGASNNYHHGSNAQGSTAQQDSEETE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagatccgttcctgaacgcattgcgtcgggaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaaggtcaaatcgagtcctttgat
cagttcgtgatcctgttgaagaacacggtcagccagatggtttataagcacgcgatttct
actgttgtcccgtctcgcccggtttcccatcacagcaacaatgccggtggcggcgccagc
aataactaccatcacggtagcaacgcgcagggttctactgcgcaacaggacagcgaagag
actgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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