KEGG   Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B4878Help
Entry
SeAg_B4878        CDS       T00751                                 

Gene name
holD
Definition
(GenBank) DNA polymerase III, psi subunit
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
sea  Salmonella enterica subsp. enterica serovar Agona SL483
Pathway
sea00230  Purine metabolism
sea00240  Pyrimidine metabolism
sea01100  Metabolic pathways
sea03030  DNA replication
sea03430  Mismatch repair
sea03440  Homologous recombination
Module
sea_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:sea00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    SeAg_B4878 (holD)
   00240 Pyrimidine metabolism
    SeAg_B4878 (holD)
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    SeAg_B4878 (holD)
   03430 Mismatch repair
    SeAg_B4878 (holD)
   03440 Homologous recombination
    SeAg_B4878 (holD)
Enzymes [BR:sea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SeAg_B4878 (holD)
DNA replication proteins [BR:sea03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SeAg_B4878 (holD)
DNA repair and recombination proteins [BR:sea03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch exicision repair)
    DNA polymerase III holoenzyme
     SeAg_B4878 (holD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_III_psi
Motif
Other DBs
NCBI-ProteinID: ACH51050
UniProt: B5F513
Position
4753499..4753936
Genome map
AA seq 145 aa AA seqDB search
MTSRRDWQLQQLGITQWALRRPGALQGEIAISLPAHVRLIVVAEELPALNEPLMRDILRA
LTVSPDQVLPLAPERVAMLPQGSRCNSWRLGTDAPLQLEGAQVTTPAFNELRANPAARAA
LWQQICEHEHDFYPQHDRSPRSLAD
NT seq 438 nt NT seq  +upstreamnt  +downstreamnt
atgacatcccgacgagactggcagttacagcaactgggtattacgcagtgggcgctgcga
cgtcctggcgcgctacagggcgagattgcgatttcccttcccgcgcacgttcgtctgatc
gtggttgcagaggaattacccgcgctgaacgagccgctaatgcgcgatattttacgcgcg
ttgaccgtgagtcccgatcaggttttacccctggcgcctgagcgcgtcgccatgctgccg
cagggcagccgttgtaatagctggcggttaggaactgacgcgccgctccaactcgaaggc
gctcaggtcacgacgccggcgtttaatgaactccgggcaaacccggcggcacgcgccgca
ctatggcaacaaatctgcgaacatgaacacgatttctatcctcagcacgaccgatctccc
cgcagcctggcagattga

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