KEGG   Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_000680
Entry
SEEB0189_000680   CDS       T02739                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
seeb  Salmonella enterica subsp. enterica serovar Bareilly
Brite
KEGG Orthology (KO) [BR:seeb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seeb03032]
    SEEB0189_000680 (gyrB)
   03400 DNA repair and recombination proteins [BR:seeb03400]
    SEEB0189_000680 (gyrB)
Enzymes [BR:seeb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SEEB0189_000680 (gyrB)
DNA replication proteins [BR:seeb03032]
 Prokaryotic type
  DNA Topoisomerases
   SEEB0189_000680 (gyrB)
DNA repair and recombination proteins [BR:seeb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SEEB0189_000680 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C GyrB_hook Toprim HATPase_c HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: AGQ57418
UniProt: A0A4D6P0I7
Position
55662..58076
AA seq 804 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLF
EPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFE
QALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagatatcgtc
gtgactattcacgccgataactccgtgtccgtaacggatgatggccgtggcattccgacc
gggattcacccggaagaaggcgtctcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaatttgacgataactcctataaagtctccggcggtctgcacggcgtgggcgtc
tcggtagtcaacgctctgtcgcaaaaactggaactggttatccagcgagatggcaaaatt
caccgtcagatctacgagcacggcgtgccgcaggcacccctggccgtcactggcgatacc
gataaaaccggcacgatggtacgtttctggccgagccacgaaaccttcaccaacgtcact
gaatttgaatatgagatcctggcgaaacgcctgcgtgaactgtcattcctgaactcaggc
gtctccatccgcctgcgcgacaagcgcgatggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctgaacaagaataaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtatcggcgtggaagtagcgctacagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtacc
cacctggcaggcttccgtgcggcgatgacccgcacgctgaacgcctatatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgatgatgcccgtgaaggcctgatt
gcggtggtttccgtgaaggtgccggacccgaaattctcctcgcagaccaaagataagctg
gtctcttccgaggtgaaatcggcggtggaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatctgacgcgaaaatcgtcgtcggcaaaattatcgacgccgcgcgt
gcgcgtgaagcggcgcgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctcgattta
gccggtctgccgggcaaactggcggattgtcaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgtaaaaac
caggcgattctgccgctgaagggtaaaatcctcaacgtcgagaaagcgcgcttcgacaag
atgctctcctctcaggaagtggcgacgctgattaccgcgctgggctgcggtatcggtcgc
gacgagtacaacccggacaagctgcgctatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgttgaacgcggccacgtctacattgcccagccgccgctgtacaaagtcaagaaaggc
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatttccatcgcg
cttgacggtgcgactctgcacgcgaacgctcatgcgccggcgctatccggcgaagcgtta
gaaaaactggtctctgaatataacgccacgcagaaaatgattggtcgtatggagcgtcgc
ttcccgaaagcgctgctcaaagagctggtgtatcagccaactctgaccgaagccgatctt
tctgatgagcagactgtaacgcgctgggtgaatgcgctgattaccgagctgaacgagaaa
gagcagcacggcagtcagtggaagttcgatgttcatactaatacggaacagaatctgttc
gagcctatcgtgcgcgtgcgtacgcatggtgtggataccgattatccgttggatcacgag
tttgtgaccggcgcggaatatcgtcgtatctgcacgctgggcgagaagctgcgcggtctg
attgaagaggacgcgtttatcgaacgcggcgagcgtcgccagccggtaaccagcttcgag
caggcgctggagtggctggtgaaagaatcacgtcgcggtctggctatccagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgcgtgaccgtcaaagatgcgattgctgccgaccagctgttcactacgctg
atgggcgatgccgttgaaccgcgtcgcgcatttatcgaagagaacgccctgaaagcggcg
aatatcgatatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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