KEGG   Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_19615
Entry
SEEH1578_19615    CDS       T02736                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
seeh  Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seeh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SEEH1578_19615 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seeh03400]
    SEEH1578_19615 (sbcB)
Enzymes [BR:seeh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     SEEH1578_19615 (sbcB)
DNA repair and recombination proteins [BR:seeh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     SEEH1578_19615 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SEEH1578_19615 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SEEH1578_19615 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AGQ65506
Position
3939328..3940758
AA seq 476 aa
MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAALRTDNDFNVIGEPEVFYCKPADDYLP
QPGAVLITGITPQEAREKGENEAAFARRIHALFTVPKTCVVGYNNVRFDDEVTRNIFYRN
FYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANGIEHSN
AHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAW
RGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVK
LVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRENPQVRDKVVAIFAEAEPFAA
SDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTL
DDAEQQRWLEHRRQVLTPEFLQQYANELQMLSQQYAEDKTKLGLLKSLWQYATEIV
NT seq 1431 nt   +upstreamnt  +downstreamnt
gtgacagttaaaaacgacagcatacagagcacattcctcttccacgattacgaaaccttc
ggtacgcatccagccctcgacagacctgcgcaattcgccgcgctccgtacggataacgac
ttcaacgttattggcgagccggaggtgttttattgcaaacccgccgatgattatctaccg
cagcccggcgcggtgctgattaccggcatcacgccgcaggaagcgcgtgagaaaggagaa
aacgaagccgctttcgccagacgcattcatgcgctgtttaccgttcctaaaacctgcgtt
gtgggctacaacaatgtgcgctttgatgatgaagtcacgcgcaatattttttatcgcaac
ttttacgatccctacgcctggagctggcagcatgataattcacgttgggatctattggat
gtcatgcgcgcctgttatgcgctgcgcccggagggaattaactggccggaaaacgacgac
ggcctgcccagctttcgtctggaacatttaacccgggcgaacgggatcgaacacagcaac
gcgcatgatgcgatggcggatgtctacgccactattgcgatggcgcaactggtgaaaaca
cgccagccgcggctgtttgattatctttatagccaccgcagtaaacataaactggcggcg
ctgattgacgttccgcaaatgaagccgctggtgcatgtctccggcatgtttggcgcgtgg
cgcggtaatacaagctgggtcgcgccgctggcgtggcatcctgaaaaccgtaacgcggtg
atcatggtcgatttagcaggcgatatttctcctcttcttgagctggacagcgataccctt
cgcgagcggctttatacggccaaagccgatcttggcgatcacgccgcagtgccggtaaag
ctggtgcatatcaataaatgtccggtactggcgcaggcgaataccttgcgcccggaggat
gccgaccggctgggaattaaccgccagcactgcctggataacctgaaagtgctgcgtgaa
aacccgcaggtccgcgacaaagtggtggcgattttcgccgaagccgaaccttttgccgcc
tcggataacgttgatgcccagctctatgatggttttttcagcgatgccgatcgcgcagcc
atgaaaatcgtactcgaaaccgagccgcgtaacctgcccgcgctggacattacctttgtc
gataagcgcattgagaagctgctgtttaattaccgcgcacgcaattttcccggtacgctg
gatgacgcagagcagcagcgctggctggagcatcgacgtcaggtgctgacgccggagttt
ttacaacaatatgccaatgaattgcagatgctttctcagcagtatgcggaagataaaacg
aagctggggttgctgaaatcactgtggcagtacgcaaccgagattgtgtaa

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