KEGG   Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG1034
Entry
SG1034            CDS       T00770                                 
Name
(GenBank) putative clpB-protease
  KO
K11907  type VI secretion system protein VasG
Organism
seg  Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Pathway
seg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:seg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SG1034
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:seg02044]
    SG1034
Secretion system [BR:seg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SG1034
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 NACHT AAA_7 AAA_14 bpMoxR nSTAND3 RsgA_GTPase Clp_N AAA_24 ABC_tran_CTD AAA_18 nSTAND1 Rad17 Sigma54_activat AAA_6 SpGH101_helical
Other DBs
NCBI-ProteinID: CAR36922
UniProt: B5R7B4
Position
complement(1122020..1124683)
AA seq 887 aa
MIQIDLATLVKRLAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERA
EIGADDLRQALTVENYATARSSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLA
LLHSPLRYLPPAAARLLTAINRDLLRQDFAGWTKESAESVILNADGQTASAIADTGDTLL
ARYAKNMTDDARQGRLDPVLCRDNEIDLMIDILCSRRKNNPVVVGEAGVGKSALIEGLAL
RIIAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAH
TLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDSGLSAVYEQSHGVLI
DDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSSPPRQISALTPLRQQCEAE
IRQLEREIRIGLRSDTSRLNEVLAQYDETLSELDALEAAWRQQQTLVQEIIALRKGLLDE
TDATGNDETATPETEAVGSDDESVTAPPEAEPEISPAARLAQLTAELDALHHTQLLVSPH
VDKKQIASVIAEWTGVPLNRLSQNEMSVITDLPQWLGDTIKGQALAIKHLHKHLLTARAD
LRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSP
PGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCK
NVVFFLTSNLGYQVIVEHADNPEAMQEALYPVLADFFKPALLARMEVVPYLPLSRETLAV
IIAGKLARLDNVLRARFGAEVVIEPEVTDEIMQRVTRAENGARMLESVIDGEMLPPLSLL
LLQKMAANIAIARITLGVANGAFTADVEDVPDEDTQPVAEAEDEAVL
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgatccagattgacttagccaccctggtaaaacggcttgctcccttcgcgaaacaggcg
ctggaagcggcggcgtcggagtgtatgagccagcaggcggcagaaattaccgtcgcgcat
gtgctgctacagatgctggcgaccccgcgcagcgactttcgggtgattgccgaacgtgcg
gagatcggcgccgatgatttacgccaggcgctgacggtggaaaattacgccaccgcccgt
tcatccgacagctacccgtcgttttccccgatgctggttgaatggctgaaagaggcctgg
ctgctggcctccgcggaaatgcagcagaccgaactgcgcggcggcgtgctgctgctcgcc
ctgctgcattcgccgttgcgctacctgccgcccgccgccgcccggttgctgaccgccatc
aaccgcgacctgctccggcaggattttgccgggtggacgaaggagtccgccgaatcggtg
atcctgaatgcggacggacagaccgccagcgccatagccgataccggcgacaccctgctg
gcccgctatgccaaaaacatgaccgacgatgcccggcaggggcggcttgatccggtgctg
tgccgcgataacgaaattgacctgatgatcgatatcctctgcagccgccgtaaaaataat
ccggtggtggtgggcgaagcgggcgtgggcaaaagcgcgctgattgaagggctggcgctg
cgcattattgccggtcaggtgccggacaaactgcgcgataccgatattatgacgctggat
ctcggcgcattacaggcgggcgcgtcggtgaaaggtgaatttgagaagcgctttaagggg
ctgatggcggaagtcattcagtcgccgaaacccgtcatcctgtttatcgacgaagcccac
acgctgattggcgcgggcaaccagcagggcgggctggatatctccaacctgctcaaaccg
gcactggcgcgcggcgagctgaaaaccatcgccgccaccacctggagcgaatacaaaaaa
tacttcgagaaagactccggcctgtcggcggtgtatgagcagtcccacggcgtgctgatt
gacgatgaagccttacaggccgctgcgacgttgagcgagcgctacctgtcaggccgccag
ttgccggataaggccattgatgtgctggataccgcctgcgcccgcgtggcgattaacctc
tcctcgccgccgagacaaatctcggcgctgacccccctgcgccagcagtgtgaagcggaa
atccgccagcttgagcgtgagatccgtattggcctgcggtcggacacctcacggctaaac
gaggttctggcgcagtatgacgaaacgctgagcgaactggatgcgctggaggccgcgtgg
cgccagcagcagacgctggtgcaggagattatcgcgctgcgtaaggggctgctggacgaa
acggatgctaccggcaacgacgaaaccgcaacgcctgaaacagaggcggtgggcagtgac
gatgaatccgtcacagcgccgccggaagcggaaccggaaatttcgccagccgcccgcctc
gcgcagctcaccgccgaactggacgccctgcaccacacgcagctgctggtctccccacac
gtcgataaaaaacagatagccagcgtgattgccgaatggaccggcgtgccgcttaaccgc
ctgtcacaaaacgaaatgtcggtcatcaccgacctgccgcagtggctgggcgacaccatt
aaaggccaggcgctggcgattaagcacctgcacaaacacctgctgaccgcccgcgccgat
ctgcgccgtccgggacgcccgctcggcgcgttcctgctggccggtcccagcggtgtcggc
aaaaccgaaaccgtgctgcaactggccgaactgctctacggcggtcgccagtacctgacc
accatcaatatgtcggagtttcaggagaaacacaccgtttcacgactgattggttcgccg
ccgggctatgtcggctacggcgagggcggcgtgctgaccgaagcgattcgtcagaaaccg
tactccgtggtgctgctcgacgaggtggagaaagcccacccggacgtgctcaacctgttc
taccaggcgttcgacaagggcgagatggccgatggcgaagggcgtcttatcgactgtaaa
aatgtggtgttcttcctcacctccaacctcggctatcaggtgattgtcgaacatgccgac
aacccggaagccatgcaggaagcgctgtacccggtactggcggacttctttaaaccggcg
ctgctggcgcgtatggaagtggtgccgtacctgccgttatccagagaaacgcttgccgtc
attatcgccgggaagctggcgcggctggacaacgtactgcgcgcccgcttcggcgcggag
gtggtgattgagccggaggtgaccgacgaaatcatgcagcgcgtcacccgcgccgaaaac
ggcgcgcggatgctggagtcggtcatcgacggcgagatgctgccgccgctctccctgctg
ctgttgcagaaaatggcggcgaatatcgccattgcccgtatcacgctgggcgtggcaaac
ggcgcgtttaccgcggatgtggaggatgtgccggatgaggatactcagcccgtagcggaa
gcagaggacgaagccgttctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (30)   

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