KEGG   Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG1158
Entry
SG1158            CDS       T00770                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
seg  Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Pathway
seg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SG1158 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seg03400]
    SG1158 (ruvB)
Enzymes [BR:seg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SG1158 (ruvB)
DNA repair and recombination proteins [BR:seg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SG1158 (ruvB)
    RecFOR pathway proteins
     SG1158 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 AAA_16 nSTAND3 AAA_14 Rad17 TIP49 AAA_2 AAA_18 RNA_helicase AAA_17 NTPase_1 Bac_DnaA AAA_28 AAA_24 NB-ARC TsaE ABC_tran Sigma54_activ_2
Other DBs
NCBI-ProteinID: CAR37039
UniProt: B5R8E3
Position
1240883..1241812
AA seq 309 aa
MAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTS
GPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARS
IKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDD
GALEVARRARGTPRIANRLLRRVRDFAEVKHDGAISAEIAAQALDMLNVDAEGFDYMDRK
LLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATVRAWNH
FGITPPEMP
NT seq 930 nt   +upstreamnt  +downstreamnt
ttggcggaatatgtcggccaaccgcaggtgcgctcccagatggagatctttattcaggcg
gcaaaacggcgtggcgacgcattagatcacttgctgattttcggcccgccagggttaggt
aagacgactctggcgaatatcgttgccaatgaaatgggcgtcaatctacgaaccacgtcc
ggcccggtgctggaaaaagcaggcgatctggcggctatgctcaccaatcttgaaccgcat
gatgtgctgtttattgatgagattcaccggctttcaccggtggtggaagaggtactctat
ccggcgatggaagattaccagttggatattatgattggcgaagggcctgccgcacgttca
attaagatcgatctgccgccgtttacgctcattggcgcgacgacgcgcgccgggtcgtta
acgtccccgctacgtgaccgttttggtattgtgcagcgcctggagttttaccaggtgccc
gatctgcagcacatcgtcgggcgcagcgcaaggcacatggggcttgagatgagcgatgac
ggcgcgctggaagtggcgcgtcgggcgcgcggtacgccgcgtatagccaaccgtctgctc
agacgtgtgcgtgatttcgccgaggtgaagcatgacggggctatttcagcggaaattgcc
gcgcaggcgctggatatgctgaacgtcgatgcggaagggtttgattatatggatcgcaag
ctactgctggcggttattgataaattcttcggtggtccggtgggactggataacctggcg
gcggcgattggcgaagagcgtgaaaccattgaggatgtgctggagccgtatctgattcag
caaggctttttgcagcgcacgccgcgtgggcgtatggcaacggtgcgcgcctggaaccat
ttcgggatcacgccgccagagatgccttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (35)   

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