KEGG   Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_0251
Entry
SPUL_0251         CDS       T01740                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
sel  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03030  DNA replication
sel03430  Mismatch repair
sel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPUL_0251 (dnaE)
   03430 Mismatch repair
    SPUL_0251 (dnaE)
   03440 Homologous recombination
    SPUL_0251 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sel03032]
    SPUL_0251 (dnaE)
   03400 DNA repair and recombination proteins [BR:sel03400]
    SPUL_0251 (dnaE)
Enzymes [BR:sel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SPUL_0251 (dnaE)
DNA replication proteins [BR:sel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SPUL_0251 (dnaE)
DNA repair and recombination proteins [BR:sel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SPUL_0251 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AET52697
Position
271514..274996
AA seq 1160 aa
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDW
LVELKEGLILISGGRMGDVGRCLLRGNQALVEECVAFYETHFPDRYFLELIRTGRQDEET
YLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL
EERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIDARNQGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgtctgaaccacgtttcgttcacctgcgggtgcacagcgactactctatgatcgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcattaggtatgcctgcgctggcg
atcaccgattttaccaacctctgcggtctggtgaagttctacggagcgggtcatggcgcg
ggcattaaacccatcgtcggggcggactttaacgttcacaacgaactgctgggagatgag
ctgactcatctgacggtactggcggcgaataatacgggataccagaacctgacgttgctg
atctcgaaagcgtatcagcgcggctacggcgcggcaggcccgattatcgagcgcgactgg
ttggtagagcttaaagaaggtttgattctgatttccggcggacgcatgggcgacgtaggc
cgctgtctgctacgcggcaaccaggcgctggtggaggagtgcgttgctttctatgaaacg
cattttcccgatcgctacttcctggaactgatccgtaccggcagacaggacgaagagacc
tatctccatgctgcggttgaactggctgaggcacgtggtttgccggttgtcgcgacaaac
gatgtccgtttccttgaaagcgatgattttgacgcccatgagattcgtgtcgcgatccac
gacggtttcacgctcgacgatcctaaacgtccacgcaattattcaccgcagcagtatatg
cgcagtgaagaagaaatgtgcgagctgttctccgatattccggaggcgctggaaaatacg
gtggagattgccaaacgctgcaacgtaacggtgcgtctgggtgaatatttcctgccacag
ttcccgaccggcgatatgaccaccgaagattatctggtcaaaaaatcgaaagaggggctg
gaagagcgtctggctttcctgtttccggacgaagaagagcgcaaaaagcgtcgcccggaa
tatgacgagcgtctggatattgaactacaggttatcaaccagatggggttccctggctac
ttcctcatcgtgatggagtttatccagtggtcaaaagataacggcgtgccggtagggccg
ggacgtggttccggggctggttcgctggtggcctacgcgctgaaaattaccgaccttgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgagcacgtcgcagac
atgtacgggcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcc
gttatccgcgatgtgggccgcgttctggggcatccgtacggttttgtcgatcgtatctcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagcggaaccgcaa
ctgccggaaatttacgaggcggatgaagaggtcagagcgctgatcgatatggcgcgtaag
ctcgaaggcgtcacgcgtaacgccggtaagcacgctggcggcgtggtcatcgcgccgacc
aaaattaccgactttgcgccgctgtactgcgatgaagagggcaagcatccggttacccag
tttgataaaagcgacgtggaatatgccgggctggtgaagttcgacttcctcggtttgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacaagcggcgcgagaaaaacggc
gagccgccgctggatatcgccgccattccgctggacgataaaaaaagcttcgacatgctg
cagcgctcggaaaccacggcggtcttccagcttgaatcgcgcggcatgaaagatctgatc
aaacgtctgcagccggactgctttgaagatatgatcgcactggtggccctgttccgtccc
ggcccgttgcagtcagggatggtagataactttatcgaccgtaagcacggtcgtgaagaa
ctctcttacccggacgttcagtggcagcatgaaagcctgaagccggtactggagccgacc
tacggcatcattctgtatcaggaacaggtgatgcagattgcccaggtactttccgggtat
actctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaggagatg
gccaaacagcgttccgtttttgaagagggcgcgaaaaagaacggtatcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacgggtttaacaaatcgcac
tccgccgcttatgcgctggtttcttaccagacgctatggctaaaggcgcactatccggct
gaatttatggcggcggtgatgactgccgatatggataacaccgagaaggtcgtcggcctg
gtggacgagtgctggcggatgggactgaaaattctaccgccggatattaactccggattg
taccatttccacgttaatgatgagggcgagatcgtctacggcatcggcgcgatcaaaggc
gtcggcgaagggccgatcgaagcgatcatcgacgcgcgtaatcagggcggctatttccgc
gagctgtttgatctgtgcgcgcggaccgacaccaaaaagctcaaccgccgggtgctggaa
aagctgatcatgtccggggcgttcgaccgcctggggccgcaccgcgccgcgctgatgaac
tcattgggcgatgcgctgaaagccgccgaccagcacgctaaagcggaagctatcggtcag
gcggatatgttcggcgtgctggcggaagagccggagcaaatcgaacaatcctatgccagc
tgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacgttggggctgtac
ctgacgggccaccccatcaatcagtatttaaaagaaattgagcgctatgtcggcggggta
aggctcaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtg
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggataaataccagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagctcgcgaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcgcggctgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttacttaacgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system