KEGG   Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_1041
Entry
SPUL_1041         CDS       T01740                                 
Symbol
ymfC
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase B
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
sel  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:sel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sel03009]
    SPUL_1041 (ymfC)
Enzymes [BR:sel01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     SPUL_1041 (ymfC)
Ribosome biogenesis [BR:sel03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SPUL_1041 (ymfC)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AET53435
Position
complement(1086558..1087097)
AA seq 179 aa
MFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPG
KRTGKIYYVQVEGIPDNAALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKN
IPTSWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWREIAQEKDR
NT seq 540 nt   +upstreamnt  +downstreamnt
ttgttcaataaaccttacgatgtgttgccgcagttcacggatgaagcaggtcgccgcacg
ttaaaagattttattcctgtgcaaggcgtttatgccgcaggccgcctggaccgcgacagc
gaagggcttttggtgctgactaatgacggcgcgctgcaggcgcgcctcacgcaaccgggc
aaacgcaccggcaagatttactatgttcaggtagaaggtatcccggataatgcagcgctg
caggcgcttcgtactggcgtcacgctcaacgatggccctaccctgcccgccggtattgag
attgtcgcggagcctgactggctgtggccgcgcaccccgccgattcgcgaacggaagaat
attcccaccagttggctaaaagtcaccttatatgaaggccgcaaccgccaggtaagacgc
atgacagcgcatgtcggtcatcccactctacgattaattcgttacagcatgggcgactac
acgctcaacggcctcgataatggacagtggcgcgagatcgcacaggagaaagacagatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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