KEGG T01740: SPUL

Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_3869

Entry

SPUL_3869         CDS       T01740

Symbol

yibK

Name

(GenBank) putative RNA-methyltransferase

K03216

tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]

Organism

sel Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078

Brite

KEGG Orthology (KO) [BR:sel00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sel03016]
    SPUL_3869 (yibK)
Enzymes [BR:sel01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.207  tRNA (cytidine34-2'-O)-methyltransferase
     SPUL_3869 (yibK)
Transfer RNA biogenesis [BR:sel03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    SPUL_3869 (yibK)

SSDB

Motif

Pfam:

SpoU_methylase Malate_DH

Other DBs

NCBI-ProteinID:

AET56106

Position

complement(3908218..3908691)

AA seq 157 aa
MLNIVLFEPEIPPNTGNIIRLCANTGFRLHIIEPMGFTWDDKRLRRAGLDYHEFAAVQRH
HDYAAFVAAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPKEQKI
RIPMMPDSRSMNLSNAVSVVVYEAWRQLGYSGAVLRS

NT seq 474 nt +upstreamnt +downstreamnt
atgcttaacatcgtactcttcgaaccagaaatcccgccgaataccggcaacatcattcgt
ctttgcgccaataccggctttcgtctgcacatcatcgaaccgatggggtttacctgggat
gataagcgcttacgccgcgcagggctggactatcacgaattcgccgcggttcagcgccat
cacgattatgccgcctttgtcgccgccgaaaacccgcagcgcctgtttgcgttgacgaca
aagggcacgcccgcccatagcgccgtaagctatcaggatggcgattatttgatgtttggc
ccggaaacgcgcggcctgcccgccagcattctcgatgcgttgcctaaagagcagaagatt
cgcattccgatgatgccggatagccgtagcatgaacctgtcgaatgcggtgtcggtggtg
gtgtatgaagcgtggcgccagttaggatactccggcgcggtattacggtcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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