KEGG T00492: SACE

Saccharopolyspora erythraea: SACE_0008

Entry

SACE_0008         CDS       T00492

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

sen Saccharopolyspora erythraea

Brite

KEGG Orthology (KO) [BR:sen00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sen03032]
    SACE_0008 (gyrB)
   03400 DNA repair and recombination proteins [BR:sen03400]
    SACE_0008 (gyrB)
Enzymes [BR:sen01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SACE_0008 (gyrB)
DNA replication proteins [BR:sen03032]
Prokaryotic type
  DNA Topoisomerases
   SACE_0008 (gyrB)
DNA repair and recombination proteins [BR:sen03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SACE_0008 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3

Other DBs

NCBI-ProteinID:

Kitasato:

Cambridge:

UniProt:

Position

8507..10399

AA seq 630 aa
MYIGSTGERGLHHLVQEVVDNSVDEAMAGYATRVEVTLLADGGVRVVDDGRGIPVDMHPV
EKKPTLEVVLTVLHAGGKFGGDSYAVSGGLHGVGVSVVNALSTALEAEIHLHGHVWRQRY
EDSKPVHDLQKGERTTRTGTTITFWADPTIFETTRYNAETISRRLQEMAFLNKGLTIVLR
DERAAEEHEGGEDASGAAARATERTFHYPGGLEDFVRHINATKEPIHKKVVSFSASGKGH
ELEVAMQWNSGYNQSVYTFANTINTHEGGTHEEGFRSALTRVVNAYAKDKKLLKDKDGSL
TGDDVREGLAAIVSVKVSEPQFEGQTKTKLGNTEVKSFVQTNAFEWLTDWFERNPTEAKT
IVNKAVSSAQARVAARRAKELVRRKSAMDIGGLPGKLKDCQSNQPDECELYIVEGDSAGG
SAKEGRESRFQAILPIRGKIINVEKARIDKVLKNNEVQSIITALGTGIHDEFDLSKLRYH
KIVLMADADVDGKHIQTLLMTLLFRFMRPLIEHGHVFLARPPLYKIKWPRSEPEYAYSDK
ERDALLEAGASAGKKLPKEDGIQRYKGLGEMNADELWETTMDPATRLLMQVTLDDAATAD
ELFSVLMGEDVEARRSFITRNAKDAGLLDI

NT seq 1893 nt +upstreamnt +downstreamnt
atgtacatcggctcgaccggtgagcgcggcctgcaccatctggtgcaggaggttgtggac
aactccgtcgacgaagcgatggccggctacgcgaccagggtcgaggtgaccctgctggcc
gacggcggcgtgcgcgtcgtcgacgacggccgcggcatcccggtcgacatgcaccccgtg
gagaagaagccgacgctcgaggtcgtgctgaccgtcctgcacgcgggcggcaagttcggc
ggcgacagctacgcggtctccggtggtctgcacggcgtcggcgtgtccgtggtcaacgcg
ctctcgacggccctggaggccgagatccacctccacggtcacgtctggcggcagcgctac
gaggactccaagcccgtccacgacctgcagaagggcgagcgaaccaccaggaccgggacc
accatcacgttctgggcggacccgaccatcttcgagacgaccaggtacaacgccgagacg
atctcgcgccgcctgcaggagatggcgttcctgaacaagggcctgaccatcgtcctgcgc
gacgagcgcgccgcggaggagcacgagggcggcgaggacgccagcggcgccgccgcccgc
gcgaccgagcgcaccttccactacccgggtgggctcgaggacttcgtccgccacatcaac
gccaccaaggagcccatccacaagaaggtggtgtccttcagcgcgtccggcaagggccac
gagctggaagtggcgatgcagtggaactccggctacaaccagtcggtctacaccttcgcc
aacaccatcaacacccacgagggcggcacccacgaggagggcttccgctccgcgctgacc
cgcgtggtcaacgcctacgccaaggacaagaagctcctcaaggacaaggacggcagcctg
accggtgacgacgtccgcgagggcctggccgcgatcgtgtcggtgaaggtctccgagccg
cagttcgaaggccagaccaagaccaagctcggcaacaccgaggtcaagtcgttcgtccag
accaacgccttcgagtggctgaccgactggttcgagcgcaaccccaccgaggccaagacg
atcgtcaacaaggcggtctcgtcggcgcaggcgcgggtggccgcgcgcagggccaaggag
ctggtccgccgcaagagcgcgatggacatcggcggcctgcccggcaagctcaaggactgc
cagtccaaccagcccgacgagtgcgagctctacatcgtcgagggcgactcggccggtggt
tcggccaaggagggccgcgagtcccgcttccaggcgatcctgccgatccggggcaagatc
atcaacgtcgagaaggcgcgcatcgacaaggtcctcaagaacaacgaggtccagtcgatc
atcaccgcgctgggcaccggcatccacgacgagttcgacctgtcgaagctgcggtaccac
aagatcgtgctgatggccgacgccgacgtcgacggcaagcacatccagacgctgctgatg
acgctgttgttccggttcatgcgcccgctgatcgagcacggtcacgtcttcctggcgcgc
ccgccgctctacaagatcaagtggccgcggtcggagccggagtacgcctactccgacaag
gagcgcgacgcgctgctggaggcgggtgcctcggcgggcaagaagctgcccaaggaggac
ggcatccagcgctacaagggtctcggcgagatgaacgccgacgagctgtgggagaccacc
atggacccggcgacccggctgctgatgcaggtcaccctcgacgacgcggcgacggccgac
gagctgttcagcgtgctgatgggcgaggacgtcgaggcccggcgctcgttcatcacccgc
aacgccaaggacgcgggtctgctcgacatctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   CAMBRIDGE (1)   
   KITASATO (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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