KEGG   Saccharopolyspora erythraea: SACE_6058
Entry
SACE_6058         CDS       T00492                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
sen  Saccharopolyspora erythraea
Pathway
sen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SACE_6058 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sen03019]
    SACE_6058 (deaD)
   03009 Ribosome biogenesis [BR:sen03009]
    SACE_6058 (deaD)
Enzymes [BR:sen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SACE_6058 (deaD)
Messenger RNA biogenesis [BR:sen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SACE_6058 (deaD)
Ribosome biogenesis [BR:sen03009]
 Prokaryotic type
  rRNA helicases
   SACE_6058 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: CAM05231
Kitasato: SACE_6058
Cambridge: SACE_6058
UniProt: A4FMF6
Position
complement(6793677..6795413)
AA seq 578 aa
MPSFDELDLDPRVLQVLSEIGYETPSPIQAQTIPPLLEGHDVMGLAQTGTGKTAAFALPI
LSRLDLDAKTPQALVLAPTRELAIQVAEAFQRYAAHLPGFHVLPIYGGQSYGPQLAGLKR
GAHVVVGTPGRVIDHLNKGSLDLTGLKNLVLDEADEMLRMGFIEDVETILQSVPEQRQVA
LFSATMPPQIRKISQSYLNEPVEISVKTKTTTATNITQRYIPVRGPAKLDALTRILEVET
FDAMIVFVRTKQLTEELAEKLQARGFSAAAINGDIPQAARERTIGHLREGRVDILVATDV
AARGLDVERISHVLNYDIPHDSESYVHRIGRTGRAGRSGEAILFVSPRERHMLRSIEKAT
RQSIGQMELPSIEAVNDQRLAKFAQGITDTLAKGDLELFKGLVEEYERTHDVPAAEIAAA
LASMVQGDQPLLMEREPEPEPNRRGRDGGAAKFQPTSSDTETYRVEVGRRNRVTPSALVG
ALANEGGLPSKHIGHIDIRDGHTLIELPADLPDDMLRKLRKTQVAGRGLRISLADGEFVA
RRPHGPGRDKPRPHRKGQRSPGSSRAVAGKRRGDFSRS
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgcccagcttcgacgagctcgacctcgacccccgcgtcctgcaggtgctgtccgagatc
ggctacgaaaccccctcgccgatccaggcgcagacgatcccgccgctgctcgaaggccat
gacgtgatgggcctcgcccagaccggcaccggcaagaccgccgccttcgcgctcccgatc
ctcagcaggctcgacctcgacgccaagacaccgcaggcgctcgtgctcgccccgacccgc
gagctggcgatccaggtcgccgaggcgttccagcgctacgccgcgcacctgcccggcttc
cacgtgctgccgatctacggcggccagagctacggcccgcagctggccgggctcaagcgc
ggcgcgcacgtcgtggtcggcacccccggccgcgtcatcgaccacctcaacaagggctcg
ctcgacctcaccgggctgaagaacctggtgctcgacgaggccgacgagatgctgcggatg
ggcttcatcgaggacgtcgagaccatcctgcagtcggtgcccgagcagcggcaggtcgcg
ctgttctcggcgaccatgccgccgcagatccgcaagatcagccagtcctacctgaacgag
ccggtggagatctcggtcaagaccaagaccaccaccgccaccaacatcacccagcgctac
atcccggtgcgcggcccggccaagctcgacgcgctgaccaggatcctcgaggtcgagacc
ttcgacgcgatgatcgtgttcgtgcgcaccaagcagctcaccgaggagctcgccgagaag
ctgcaggcgcgcgggttcagcgccgcggcgatcaacggcgacatcccgcaggccgcgcgc
gagcgcaccatcgggcacctgcgcgagggccgcgtcgacatcctggtggccaccgacgtg
gccgcgcgcgggctcgacgtcgagcgcatctcgcacgtgctcaactacgacatcccgcac
gacagcgagtcctacgtgcaccgcatcggccgcaccggccgggcgggccgcagcggcgag
gcgatcctgttcgtctccccgcgcgagcggcacatgctgcgctccatcgagaaggcgacc
cgccagtccatcggccagatggagctgcccagcatcgaggcggtcaacgaccagcggctg
gccaagttcgcccagggcatcaccgacaccctggccaagggcgacctggagctgttcaag
ggcctggtcgaggagtacgagcgcacccacgacgtgcccgcggccgagatcgccgcggcg
ctggcaagcatggtgcagggcgaccagccgctgctgatggagcgcgaacccgagcccgag
cccaaccggcgcgggcgcgacggcggcgccgcgaagttccagccgacgagcagcgatacc
gagacctaccgcgtcgaggtcgggcgccgcaaccgcgtcacccccagcgcgctggtcggc
gccctggccaacgagggcggcctgcccagcaagcacatcggccacatcgacatccgcgac
gggcacaccctgatcgagctgcccgccgacctgccggacgacatgctgcgcaagctgcgc
aagacccaggtcgccggccgcgggctgcggatcagcctggccgacggcgagttcgtcgcc
cgccgcccgcacgggccgggccgcgacaagccgcgcccgcaccgcaagggccagcgctcg
ccgggctcgtcccgggccgtcgcgggcaagcggcgcggggacttctcccgcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   CAMBRIDGE (1)   
   KITASATO (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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