KEGG T03730: SEET0819

Salmonella enterica subsp. enterica serovar Tennessee: SEET0819_03230

Entry

SEET0819_03230    CDS       T03730

Symbol

gidA

Name

(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein

K03495

tRNA uridine 5-carboxymethylaminomethyl modification enzyme

Organism

senc Salmonella enterica subsp. enterica serovar Tennessee

Brite

KEGG Orthology (KO) [BR:senc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:senc03016]
    SEET0819_03230 (gidA)
   03036 Chromosome and associated proteins [BR:senc03036]
    SEET0819_03230 (gidA)
Transfer RNA biogenesis [BR:senc03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    SEET0819_03230 (gidA)
Prokaryotic type
    SEET0819_03230 (gidA)
Chromosome and associated proteins [BR:senc03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SEET0819_03230 (gidA)

SSDB

Motif

Pfam:

GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 AlaDh_PNT_C Pyr_redox_2 HI0933_like DAO Thi4 Pyr_redox MarR_2 NAD_binding_9 Pyr_redox_3

Other DBs

NCBI-ProteinID:

AHN78259

Position

complement(684726..686615)

AA seq 629 aa
MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV
PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK
FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL
KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE
QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ
ASRISGVTPAAISILLVWLKKQGMLRRSA

NT seq 1890 nt +upstreamnt +downstreamnt
atgttttatcaggatccttttgacgtcattattattggcgggggtcatgcaggcactgag
gccgcgatggccgcagcgcgtatgggtcaacagactctgcttttgacacacaatattgac
acgttgggacagatgagctgcaacccggcgatcggcggtattggaaagggacatctggta
aaagaggtggatgcgctcggcggtctgatggcgaaagcgatcgatcaggcaggtattcag
tttaggatactaaacgccagcaaaggtccggccgttcgcgctacccgggctcaggcggat
cgagtcttatatcgccaggcggtgcgtaccgcgctggagaatcagccgaatctgatgatc
ttccagcaagctgttgaagatctgattgtcgaaaacgatcgcgttgtcggcgctgtgacc
caaatggggctcaaattccgcgcgaaagcggtggtgctgaccgtcggaaccttcctggac
ggcaaaattcatattggtctggataactacagcggcggtcgtgctggcgatccgccatcc
atcccgctgtctcgccgtctgcgtgagctcccgctacgcgtcagccgcctgaaaacgggc
acaccgccgcgtattgatgcgcgtactatcgatttcagcgtgttggctcaacagcatggc
gataacccgatgccggttttctcgtttatggggaatgcttctcagcatccgcaacaggtg
ccgtgttacatcacgcataccaatgagaaaacccatgacgtgattcgtaataacctcgat
cgtagcccaatgtacgctggcgtgatcgaagggatcggcccacgctactgtccttcgatc
gaagacaaggtgatgcgttttgccgatcgtaaccagcatcagatcttccttgagccggaa
ggactgacctctaacgagatttaccctaacggtatctccaccagtctgccgtttgacgtg
cagatgcagattgtccgttccatgcagggcatggagaacgcgaagatcgttcgccctggt
tacgcgattgagtacgatttcttcgacccgcgcgatctgaaaccgacactggaaagtaaa
tttattcacggcctgttctttgctggtcaaatcaacggtactaccggctatgaagaggct
gcggcgcagggcttgctcgccggtctgaatgccgcgcgtctttccgccgacaaagagggc
tgggcgcctgcgcgttctcaggcttatctcggcgtgctggtggacgatctctgtacgctg
ggcaccaaagagccgtatcgcatgtttacctcccgcgccgaatatcgcctgatgctgcgt
gaggacaacgccgatctgcgtttgaccgaaatgggccgcgagctgggtctggtggatgat
gaacgctgggcgcgcttcaacgagaagctggaaaatatcgaacgcgaacgtcagcggctg
aaatcgacatgggtaacgccgtctgcggaatccgccgatgaagtgaatgcgcatttgacc
acgcctctctcccgtgaggccagcggcgaagatctgttgcgtcgtccggaaatgacctac
gcgcagctcacttcgcttgccgcattcgcgcctgcgcttgaagatgagcaagccgctgag
caggtggaaatccaggtcaaatacgaagggtatatcgctcgccagcaggatgagattgaa
aaacaactacgtaacgagaatacgttgctgcctgccacgctggattatcgtcaggtttcc
ggtctgtcgaacgaagttatcgccaagctgaacgatcataaaccggcgtctatcggccag
gcatcgcgtatctccggcgttacgccagcggcaatctccattctgctggtatggctgaaa
aaacaaggtatgctgcgtcgtagcgcttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (30)   

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