KEGG   Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_12250
Entry
SN31241_12250     CDS       T02779                                 
Name
(GenBank) Ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
senn  Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:senn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SN31241_12250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:senn03032]
    SN31241_12250
Enzymes [BR:senn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     SN31241_12250
DNA replication proteins [BR:senn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     SN31241_12250
   Elongation factors (archaeal)
     SN31241_12250
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: AGS28199
Position
1257721..1258317
AA seq 198 aa
MIEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLNDSKKLSEKRRLSLYDE
IKEKALSWSLGRAEAHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPELPVPSM
AVVKGDSRVAEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAQYGAT
AHHRRSFAPVKRALGLVS
NT seq 597 nt   +upstreamnt  +downstreamnt
atgatcgaatttgtttatccacacacccatttagtggcgggtgtggatgaagtgggccgt
ggcccgctggtgggcgccgtagtgaccgccgccgtgatcctcgatccggcgcgtccgatc
gtcggtctgaatgattccaaaaaattgtctgaaaagcgtcgtctgtcattgtatgacgag
attaaagaaaaggcgttaagctggagtctgggacgcgcggaagcgcatgaaattgatgag
ctgaatattttgcacgccaccatgctcgccatgcagcgcgctgtcgctggtctgcatatt
gcgccagaatatgtgctgatcgacggcaatcgctgtccggagctgcctgtgccgtcaatg
gccgtggtgaaaggcgacagccgcgtggcggagattagcgcggcgtctattctggcgaaa
gtcacccgcgacgcagaaatggcggcgctggatatcgtttttcctcagtatggctttgcg
cagcacaaaggctatccaaccgcttttcatctggaaaagttggcccagtatggcgcgacg
gcgcaccaccgacgcagttttgcgcctgttaaacgcgctctgggacttgtgtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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