KEGG   Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_34670
Entry
SN31241_34670     CDS       T02779                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K23385  D-ornithine/D-lysine decarboxylase [EC:4.1.1.116]
Organism
senn  Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn00310  Lysine degradation
senn00470  D-Amino acid metabolism
senn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:senn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    SN31241_34670
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SN31241_34670
Enzymes [BR:senn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.116  D-ornithine/D-lysine decarboxylase
     SN31241_34670
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AGS30439
Position
complement(3495833..3497215)
AA seq 460 aa
MQNYNQLREQVINGDRRFQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQ
AFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVV
KKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTA
FHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEE
VLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEIC
IEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFY
VYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIE
SQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVKYDIY
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcagaattacaaccagctacgtgagcaggtaatcaacggcgatcgccgtttccagcac
aaagacggtcatttgtgttttgaaggggtcgatctggacgctctggcgcgccagtacccc
acgccgttctatgtgttttctgagccggagattattcgtaacattcatgaaatccagcag
gcatttgcggcgcataaaaataccaaaaccttctttgcgtcaaaaacctgctcggtcatg
ggggtattgaaagccattcgtgacgccggaatttgcgcggaggcaaactcacaatatgag
gttcgcaagtgtctggagataggctttcgcggcgatcagatcgtcttcaacggcgtggtg
aaaaagcctgccgatctggaatatgccatcgccaacgatctgtatcttattaatgttgat
agcctgtatgagctggaacatattgatgccatctctcgcaagctgaagaaagtcgccaat
gtttgcgtccgtgtagagccgaatgttccctcggcgacgcatgcggaactggttaccgct
ttccatgcgaagtcaggtctcgacctggaacaggcggaagaaacctgccgccgcattctg
gcgatgccttatgtgcatttgcgcggcttgcatatgcatgtgggcgatcaggtgccggag
tcagagcctttcgcaaaagcgactaaagtgctggtggatgaatcccgtcgcctggaagag
gtgctcggtattaaatttgatttgatcaacgtgggcggcggaattccggttccctataaa
tatgacgatgagaatggcgacccgttaaaagataatatgtatgccggtattaccgcccag
gattttgccgatgcggtcattcgcgaagtgcataaatggcgtaccgatgtggaaatatgt
attgaaccgggacgtaaagtgaccgggtcggcggcggttttactgacggaagtctcctgc
gaaaaacgtaaaacaaattacgatcttaacggcaatgtggaatgccacgttgaatggaaa
tttgtcgacgctggttacagcgtactctctgacagccagcattttgactggttcttttat
gtctataacgcctctcgcatgacggcagcgcacgacgcctggataaaattagccgggccg
ctgtgtgatggcggagattatttccacatgggagtgaaaggcgaagagtttttactgccg
aaggagactcatgttggcgatattgtcgcgtttcttgatgccggggcatacaccattgaa
agtcaaaccgtttataacaaccgtccgcgcacgggcgtggtgatgatcgataaaaatggt
gagacgcgtctgattcgtcgggaagacagttacgaagatatggtcaagtacgacatttat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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