KEGG   Salmonella enterica subsp. enterica serovar Agona 24249: Q786_06100
Entry
Q786_06100        CDS       T02944                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sens  Salmonella enterica subsp. enterica serovar Agona 24249
Brite
KEGG Orthology (KO) [BR:sens00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sens03016]
    Q786_06100
Enzymes [BR:sens01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Q786_06100
Transfer RNA biogenesis [BR:sens03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Q786_06100
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: AHB43952
Position
1283824..1284939
AA seq 371 aa
MIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWS
PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFAAMVEE
YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR
LMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENL
WAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDMPGYR
KAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAELMAE
KLTLLLQEYPR
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgattgaaacggacgatgcgctggcgagcctgtgtgaggctgtccgcgcatgtccggct
attgctttagatacggaatttgtccgtacccgcacctattacccgcagttaggattgatc
cagttatttgacggggcaaatgtcgccctgatcgatccgctcggcatcagcgactggtcg
ccgttaaaagcggtgctgcgcgatacgggaatcaccaaatttctgcacgcgggtagcgaa
gatctggaagtatttctgaatgcgtttggcgaactgccggaacccctgattgatacgcaa
attctggcggcgttttgcgggcgtccgctgtcgtggggttttgcggcgatggtagaagag
tatacgggcgtggcgctggataaaagcgaatctcgtaccgactggttagcccggccttta
agcgagcgtcagtgtgaatacgcggcggcggatgtctggtatctgttaccgatcgccaaa
aagctgatgattgaaactgaagccgcaggatggctgcctgccgcgcttgatgaatgccga
ttgatgcagcagcgtcgtcaggagattcaggcgccggaagaggcatggcgggatatcact
aatgcctggcaactgcgtacccgccagttagcctgtctgcaacttttagctgactggcgg
ctgcgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgtgaagaaaacctg
tgggcggtcgcgcgttatatgccgggcagtctcggtgagctggatagcctggggctttcc
ggcagcgagattcgttttcacggcaagacgttgatatcgctggtggcgaaagcacaggcg
ttaccggaagaggcattgccggagcccctgttgaatctgatggacatgccgggctatcgc
aaagcgtttaaggccatcaaagcgctggtggcggaggtgagcgcgtcgcatcacgtcagc
ggcgagctactggcatcgcgtcggcagattaatcagttgcttaactggcactggaaatta
aaaccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaactgatggcggag
aagttaactcttctgttgcaggagtacccgcgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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