KEGG   Sodalis endosymbiont of Henestaris halophilus: HBA_0411
Entry
HBA_0411          CDS       T05311                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
seny  Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03030  DNA replication
seny03430  Mismatch repair
seny03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seny00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBA_0411 (holB)
   03430 Mismatch repair
    HBA_0411 (holB)
   03440 Homologous recombination
    HBA_0411 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seny03032]
    HBA_0411 (holB)
   03400 DNA repair and recombination proteins [BR:seny03400]
    HBA_0411 (holB)
Enzymes [BR:seny01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HBA_0411 (holB)
DNA replication proteins [BR:seny03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HBA_0411 (holB)
DNA repair and recombination proteins [BR:seny03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HBA_0411 (holB)
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid BLF1
Other DBs
NCBI-ProteinID: SNC58665
UniProt: A0A2C8CWP7
Position
I:687323..688318
AA seq 331 aa
MKWYPWLTVPYRDILSRYQLARGHHALLLHSKPGTGELSLCYAISRWLICRQPNGIKSCG
RCHSCRLMLAGNHPDFYQPELEKNQQSLGGDSIRTIIDGLYERAYQGGMKVVSLLYVEQL
TELAVNVLLKTLEEPPENTYFLLVCQTPARLLATLRSRCFYWLLRTPHEELGLRWLREMG
YDNPLSAVTALRLCDGAPLAAKILLNPIRWQVREELCVVLREVLTHGDLLALLPTLNRDK
DIKPLHWLLSLLTDALKWQQNAQEFIINADKTPLVAELAARWPARVLMIHWQQLLHCLLQ
CQEISGVNRELFLTYHLLNCEYGVANAYAFL
NT seq 996 nt   +upstreamnt  +downstreamnt
atgaaatggtatccctggctcactgttccttatcgggatattctgtctcgatatcagtta
gcgcgcgggcatcatgccctactactgcatagtaagcccggcactggagagctgtcgttg
tgctatgctatcagccgttggttaatatgccgacagccaaacggtattaaaagctgtggt
cgttgtcatagttgccgtcttatgctggccggcaatcatcccgacttttatcaaccagag
ctggaaaaaaaccagcagagtttgggaggagacagtatccgtactattatagatggctta
tatgagcgcgcttatcaaggcggaatgaaagttgtttcgctgctttacgttgagcaactt
acggagctcgcagttaatgtactattaaaaactttagaagaaccacctgaaaatacttat
tttttgctagtttgccagacgccagcgcgtttgttggcaacgctgagaagccgatgtttt
tattggttgctgcggaccccgcatgaagagctaggcctgcgttggttacgggagatgggt
tatgataatccgctgtcagcagtcactgcactgcgtctgtgcgacggtgcacccttagca
gcaaagattttgctgaatccgattcgctggcaggttcgggaggaattgtgcgtagtattg
cgagaagttcttacccacggagatttattagcgctgctgccgacgctaaatcgagataaa
gatatcaaaccgctgcattggttgctgagcttgttgactgatgcactgaaatggcagcaa
aatgctcaagaatttataatcaacgctgataagactcctttagtggctgagttggcggcg
cgctggccagctcgcgtgcttatgattcattggcagcagttgctgcattgtttgctccaa
tgtcaagagataagcggtgttaatagagaattatttttgacttaccatttgctgaattgt
gaatatggcgtcgcgaatgcctatgctttcttataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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