KEGG T00110: SE0952

Staphylococcus epidermidis ATCC 12228: SE0952

Entry

SE0952 CDS T00110

Definition

hypothetical protein

Orthology

K12574

ribonuclease J [EC:3.1.-.-]

Organism

sep Staphylococcus epidermidis ATCC 12228

Pathway

sep03018

RNA degradation

Class

Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:sep03018]

SSDB

Motif

Pfam:

Lactamase_B RMMBL Lactamase_B_2 vATP-synt_E HTH_10

Other DBs

NCBI-GI:

27467870

NCBI-GeneID:

1057661

UniProt:

Q8CST0

Position

957040..958758

AA seq 572 aa
MSLYMDGSLFIGGNILSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFP
EDEMLGVDIVIPDIQYVIENKERLKGIFLTHGHEHAIGAVSYVLEQIDAPVYGSKLTIAL
VKEAMKARNIKKKVRYYTVNHDSIMRFKNVNVSFFNTTHSIPDSLGVCIHTSYGSIVYTG
EFKFDQSLHGHYAPDLKRMAEIGDEGVFALISDSTEAEKPGYNTPENIIEHHMYDAFAKV
KGRLIVSCYASNFVRIQQVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPI
NEVENYPKNEVIIIATGMQGEPVEALSQMARKKHKIMNIEEGDSIFLAITASANMEVIIA
DTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMLNIMKPEYFVPVQGEFKMQIAHAKLA
AETGVAPEKIFLVEKGDVISYNGKDMILNEKVQSGNILIDGIGVGDVGNIVLRDRHLLAE
DGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEELLKEAEEKVRKIVEEGLQEKRIEW
SEIKQNMRDQISKLLFESTKRRPMIIPVISEI

NT seq 1719 nt +upstreamnt +downstreamnt
gtgagtttatatatggacgggtcactatttataggaggtaacattttgagtttaataaag
aaaaaaaataaagatattcgtattattccactcggtggagtaggcgaaatcgctaaaaat
atgtacatcgttgaagtagacgatgaaatgtttatgttggatgcaggattaatgttccca
gaagatgaaatgcttggggtagatatcgttattcctgacattcaatatgtcattgaaaac
aaagaaagattaaaaggaatatttcttacacacggtcatgaacatgctataggcgcagta
agttatgtgttagaacaaatcgatgcaccagtttatggttctaaattgacaatcgcactt
gttaaagaagcaatgaaggcccgaaatattaaaaagaaagtacgttactatactgtaaac
catgattcaattatgagatttaaaaatgttaacgtgagtttctttaatacgacacatagc
attcctgatagcttaggcgtatgtattcatacttcgtatggttctatagtttatactgga
gagtttaagtttgatcaaagtttgcatggacattatgctccagacttgaaacgtatggca
gaaattggtgatgagggtgtgttcgcattaatcagtgattcaacagaagctgaaaagcct
ggatataacacgcctgaaaatattattgaacatcacatgtatgatgcttttgccaaggtt
aaaggtagacttattgtatcatgctatgcttcaaacttcgttcgtattcaacaagtgctt
aacattgcaagtcaacttaatcgtaaagtgtcatttttaggtcgttcacttgaaagttcg
tttaacatagcacgtaaaatgggatactttgatataccaaaagatttattaatacctatt
aacgaagtggaaaattatcctaaaaatgaagtgattattattgctacaggtatgcaaggt
gaaccagtagaagcattaagtcaaatggctcgcaaaaagcataaaattatgaacatagaa
gaaggagattcaatattcctagcaattactgcttcagctaatatggaggttattattgca
gatacattaaatgagttagtgcgtgctggagcacatataattccaaacaacaagaaaatt
catgcgtcaagtcatggttgtatggaagaattgaaaatgatgttaaatattatgaaacct
gaatattttgtacctgttcaaggtgaatttaaaatgcagattgcacatgccaaattagca
gcagaaaccggtgtagcacctgagaaaattttcttagttgaaaaaggcgacgtgattagt
tataacggtaaagatatgattttaaatgaaaaagttcaatcaggtaatatacttattgat
gggattggcgttggtgacgtaggtaatatcgtattaagagacagacatctattagccgaa
gacggtatttttattgcggttgtgacattagatcctaaaaatcgacgtattgctgcagga
cctgaaattcaatcaagaggcttcgtctatgttagagaaagtgaagaacttttgaaagag
gctgaagaaaaagtacgtaaaattgtagaggaaggtcttcaagaaaaacgaatagaatgg
tcagaaatcaagcaaaatatgagagatcaaatcagtaagttactatttgagagtacaaaa
cgccgtccaatgattattccagtcatatcggagatctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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