KEGG T00229: SERP0842

Staphylococcus epidermidis RP62A: SERP0842

Entry

SERP0842 CDS T00229

Definition

metallo-beta-lactamase

Orthology

K12574

ribonuclease J [EC:3.1.-.-]

Organism

ser Staphylococcus epidermidis RP62A

Pathway

ser03018

RNA degradation

Class

Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:ser03018]

SSDB

Motif

Pfam:

Lactamase_B RMMBL Lactamase_B_2 vATP-synt_E HTH_10

Other DBs

NCBI-GI:

57866765

NCBI-GeneID:

3241570

UniProt:

Q5HPR6

Position

850644..852350

AA seq 568 aa
MDGSLFIGGNILSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEM
LGVDIVIPDIQYVIENKERLKGIFLTHGHEHAIGAVSYVLEQIDAPVYGSKLTIALVKEA
MKARNIKKKVRYYTVNHDSIMRFKNVNVSFFNTTHSIPDSLGVCIHTSYGSIVYTGEFKF
DQSLHGHYAPDLKRMAEIGDEGVFALISDSTEAEKPGYNTPENIIEHHMYDAFAKVKGRL
IVSCYASNFVRIQQVLNIASQLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVE
NYPKNEVIIIATGMQGEPVEALSQMARKKHKIMNIEEGDSIFLAITASANMEVIIADTLN
ELVRAGAHIIPNNKKIHASSHGCMEELKMMLNIMKPEYFVPVQGEFKMQIAHAKLAAETG
VAPEKIFLVEKGDVISYNGKDMILNEKVQSGNILIDGIGVGDVGNIVLRDRHLLAEDGIF
IAVVTLDPKNRRIAAGPEIQSRGFVYVRESEELLKEAEEKVRKIVEEGLQEKRIEWSEIK
QNMRDQISKLLFESTKRRPMIIPVISEI

NT seq 1707 nt +upstreamnt +downstreamnt
atggacgggtcactatttataggaggtaacattttgagtttaataaagaaaaaaaataaa
gatattcgtattattccactcggtggagtaggcgaaatcgctaaaaatatgtacatcgtt
gaagtagacgatgaaatgtttatgttggatgcaggattaatgttcccagaagatgaaatg
cttggggtagatatcgttattcctgacattcaatatgtcattgaaaacaaagaaagatta
aaaggaatatttcttacacacggtcatgaacatgctataggcgcagtaagttatgtgtta
gaacaaatcgatgcaccagtttatggttctaaattgacaatcgcacttgttaaagaagca
atgaaggcccgaaatattaaaaagaaagtacgttactatactgtaaaccatgattcaatt
atgagatttaaaaatgttaacgtgagtttctttaatacgacacatagcattcctgatagc
ttaggcgtatgtattcatacttcgtatggttctatagtttatactggagagtttaagttt
gatcaaagtttgcatggacattatgctccagacttgaaacgtatggcagaaattggtgat
gagggtgtgttcgcattaatcagtgattcaacagaagctgaaaagcctggatataacacg
cctgaaaatattattgaacatcacatgtatgatgcttttgccaaggttaaaggtagactt
attgtatcatgctatgcttcaaacttcgttcgtattcaacaagtgcttaacattgcaagt
caacttaatcgtaaagtgtcatttttaggtcgttcacttgaaagttcgtttaacatagca
cgtaaaatgggatactttgatataccaaaagatttattaatacctattaacgaagtggaa
aattatcctaaaaatgaagtgattattattgctacaggtatgcaaggtgaaccagtagaa
gcattaagtcaaatggctcgcaaaaagcataaaattatgaacatagaagaaggagattca
atattcctagcaattactgcttcagctaatatggaggttattattgcagatacattaaat
gagttagtgcgtgctggagcacatataattccaaacaacaagaaaattcatgcgtcaagt
catggttgtatggaagaattgaaaatgatgttaaatattatgaaacctgaatattttgta
cctgttcaaggtgaatttaaaatgcagattgcacatgccaaattagcagcagaaaccggt
gtagcacctgagaaaattttcttagttgaaaaaggcgacgtgattagttataacggtaaa
gatatgattttaaatgaaaaagttcaatcaggtaatatacttattgatgggattggcgtt
ggtgacgtaggtaatatcgtattaagagacagacatctattagccgaagacggtattttt
attgcggttgtgacattagatcctaaaaatcgacgtattgctgcaggacctgaaattcaa
tcaagaggcttcgtctatgttagagaaagtgaagaacttttgaaagaggctgaagaaaaa
gtacgtaaaattgtagaggaaggtcttcaagaaaaacgaatagaatggtcagaaatcaag
caaaatatgagagatcaaatcagtaagttactatttgagagtacaaaacgccgtccaatg
attattccagtcatatcggagatctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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