KEGG S.epidermidis_RP62A: SERP0986

Staphylococcus epidermidis RP62A: SERP0986

Entry

SERP0986 CDS S.epidermidis_RP62A

Gene name sucA

Definition 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Pathway ser00020 Citrate cycle (TCA cycle)
ser00310 Lysine degradation
ser00380 Tryptophan metabolism
ser01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Citrate cycle (TCA cycle)
[PATH:ser00020]
Metabolism; Amino Acid Metabolism; Lysine degradation
[PATH:ser00310]
Metabolism; Amino Acid Metabolism; Tryptophan metabolism
[PATH:ser00380]

SSDB

Motif Pfam: E1_dh Transket_pyr

Other DBs NCBI-GI: 57866887
NCBI-GeneID: 3242079
JCVI-CMR: SERP0986
UniProt: Q5HPC6

Position complement(1002485..1005289)

AA seq 934 aa
MTKNKKEFTEAPVNFGANLGLMLDLYDDYLQDPSSVPEDLQVLFSTIKTGEAHIEAKPTT
DGGGSQAGDSTIKRVMRLIDNIRQYGHLKADIYPVNPPERQNVPKLEIEDFDLDKETLEK
ISSGIVSEHFKDIYDNAYDAIVRMERRYKGPIAFEYTHINNNKERVWLKRRIETPYKASL
NDNQKKELFKKLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQHTITLAGNEGIKNIQ
IGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLELTSGWTSDVKYHLGGVK
TTNSYGIEQRISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGGPSTDFHKAMPIIIHGDA
AYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPFDGRSTTYSSDVAKGYDVPI
LHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITNPVPYQNIRK
HDSVEILYGKKLVDEGIISEDEMNEVIDSVQKEMRTAHDKIDKNDKMNNPDMEKPESLQL
PLQSDTKDFSFDHLKEINDAMLDYPKDFHVLKKLNKVLEKRREPFEKEGGLVDWAQAEQL
AFATILQDGTSIRLTGQDSERGTFSHRHAVLHDEENGNTFTPLHHVPQQQATFDIHNSPL
SEAAVVGFEYGYNVENKGNFNIWEAQYGDFSNMSQMMFDNFLSSSRAKWGERSGLTLFLP
HAFEGQGPEHSSARLERFLQLAAENNSTVVNLSSASNYFHLLRAQAASLDTLEMRPLIVM
SPKSLLRNKTVAKPIDEFTSGGFKPIITEDIDEQKVKKVILASGKMYIDLKEYLAKNPND
SILLIAVERLYPFPEEEIKEVLKSLPHLENVSWVQEEPKNQGAWLFVYPYLKALVANKYD
LTYHGRIQRAAPAEGDGEIHKLVQTKIIESSINN

NT seq 2805 nt +upstreamnt +downstreamnt
atgactaagaacaagaaagaatttacagaggctcctgtaaacttcggtgcaaatcttggc
cttatgctagatttgtatgatgattatctacaagatccatcatccgtacctgaagattta
caagtcttgttcagtacaattaaaacaggtgaagctcatatcgaagctaaacctaccact
gatgggggtggttcacaagcgggagatagcacaattaaacgtgttatgcgcttaatcgat
aatattcgtcaatacggacatttaaaagcagatatttatccagtaaatcctccagagcgt
caaaatgttcctaaattagaaatcgaagattttgatttagataaagaaactttggaaaaa
atatcatctggaattgtctctgaacattttaaagacatttatgacaatgcctatgatgca
attgttcgtatggaaagacgttacaaaggaccgatagcttttgaatacactcacattaat
aataataaagaacgtgtgtggttaaaaagaagaattgaaacgccttataaagcaagttta
aacgataatcaaaaaaaagaacttttcaaaaaactcgcacacgtagaaggttttgaaaaa
tatttgcacaaaaattttgttggggctaaacgtttttcaattgaaggtgtcgatacgtta
gttccaatgcttcaacacacaatcacattagcaggtaacgaggggattaaaaacattcaa
atcggtatggctcaccgtggacgtttaaatgtattaacgcatgtcttggaaaaaccttat
gagatgatgatttcagaatttatgcatacagatccaatgaagtttttaccagaagatggt
agtttagaattaacttcaggttggacatcagatgtgaagtatcacctaggtggcgttaaa
acgactaactcatatggaatagaacaacgtatttctttagcgaataatccaagtcatttg
gaaatcgttgcacccgttgttgctggtaaaacaagagcagcacaagataatacacatcaa
gtaggaggtccatctaccgacttccataaagcaatgccgattattatacatggtgatgcg
gcatatccaggtcaaggtattaattttgaaacgatgaacttaggtagtttaaaaggatat
tctacaggtggttcacttcatattattacaaataatagaatcggttttacaactgaacct
tttgatggacgttcaacaacgtactcttccgacgtagctaaaggttacgatgttccaata
ctacacgtaaatgccgatgatgtagaagcaacaattgaagctattgaaattgcaatggag
ttccgtaaagaatttcataaagatgtagttattgatttagtaggttatcgtcgttatggg
cataatgaaatggatgagccttctattactaatccagttccataccaaaatattagaaaa
catgattcagttgaaattttatatggtaaaaagttagttgatgaaggtattatttctgaa
gacgaaatgaatgaagtcattgacagtgttcaaaaagaaatgcgaacagcacatgataaa
attgataaaaatgacaaaatgaataacccagatatggaaaaaccagaatcactccaacta
cctttacaaagtgatacgaaagatttctcatttgatcatttaaaagaaatcaatgatgca
atgcttgattatccaaaagattttcatgtactgaaaaagctcaataaagtacttgaaaaa
cgtagagaaccttttgaaaaagaaggggggctcgtcgattgggctcaagcagagcaactt
gcttttgcaaccatattacaagatggaacttcaattcgtttaacaggtcaagatagtgaa
cggggaacatttagtcatagacatgctgtgcttcatgatgaagaaaatggtaatacattc
acgccattgcatcatgtacctcaacaacaggctacttttgatattcataattcgccgcta
tctgaagcagctgtagttggatttgagtatggttataacgtcgaaaataaaggtaacttt
aacatatgggaagctcaatatggcgacttttctaatatgtctcaaatgatgtttgacaat
ttcctctcaagttctcgcgcaaaatggggtgagcgttcaggtttaacacttttcttacca
catgcttttgaagggcaaggaccagagcattcatcggcacgcttagaaagatttctacaa
ttagccgctgaaaataattcaactgtagttaatctatctagtgcaagtaattacttccat
ttactacgtgcgcaagccgctagtttagatacattagaaatgagaccattaattgtcatg
tcacctaagagtcttttaagaaataaaacagtagctaaacctattgatgagtttacatct
ggcggttttaaacctatcatcacagaagatatcgatgaacaaaaagtcaaaaaagtgatt
ttagcatcaggaaagatgtatattgacctaaaagaatatttagctaaaaatcctaacgat
tctattcttctcatagcagtagaaagattatatccgttcccagaagaagaaattaaagaa
gtattaaaatcgttacctcatcttgaaaatgtgtcatgggttcaagaagaacctaaaaat
caaggtgcatggttatttgtgtatccttatctaaaagcacttgttgctaataaatatgat
ttaacttatcacggtagaatacaaagagctgcacctgctgaaggcgatggagagattcat
aaacttgtacaaactaaaattattgaaagtagcattaacaattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)

DBGET integrated database retrieval system