KEGG T00229: SERP1534

Staphylococcus epidermidis RP62A: SERP1534

Entry

SERP1534 CDS T00229

Definition

DNA ligase, ATP-dependent (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ser Staphylococcus epidermidis RP62A

Pathway

ser03410	Base excision repair
ser03420	Nucleotide excision repair
ser03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ser03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ser03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ser03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_OB_2 DNA_ligase_A_C UvsW mRNA_cap_enzyme

Other DBs

NCBI-GI:

57867457

NCBI-GeneID:

3240813

UniProt:

Q5HMU4

Position

complement(1586894..1588192)

AA seq 432 aa
MQELYEILQEIKNTNSKTSKENILRKHKDNELLTETLKFLFDDLIVTGISSKKIAKPINP
MTINNIDLMKLFEYLRSNNSGKDKDIAYAKGMINNARKVFDTDVADMVKGIIIKDYPIGI
SKVTINKVFGKGFIFKFDVRKGSKFEGKLKPNVRYAQSTKLDGVRSVVLVNDKGVQIFGR
SGKTIDGLKEIEVLFNKYYEQTNTPIMFDGELLAIDETESIPNDELFRITSKILRVKGDK
SDIKFVMFDNMPLEEFYEGKSKLKFKERRDNLLAFYEQLKVIDPKVIDIVPIHYIGNDMA
EIQSVQKKLEDNGFEGSMLDEIEAYYEAKRTKSLLKFKTFHTVDLRCLRVEEHVRGNKVG
NIVVDYKGYELGVGSGFSDKDRKLFWEQKDLIEGKIVEISYFEESKNDKGGESLRFPVFK
MVRDDKDEVSLN

NT seq 1299 nt +upstreamnt +downstreamnt
atgcaagagctatacgaaatcttacaagagatcaaaaacactaacagtaagactagtaag
gagaatatccttagaaaacacaaagacaatgaattattaactgagacactaaaattcttg
tttgatgacttaattgttactggtatctcaagtaagaaaatcgctaaaccgattaaccca
atgacgattaataatattgatttaatgaaactttttgaatatctaagaagtaataattct
ggtaaggataaagatatagcatatgctaaaggtatgattaataatgctagaaaagtattt
gatactgatgttgccgatatggttaaaggtattatcatcaaagattatccaattggtatt
tcaaaagtaacgattaataaagtattcggcaaaggttttatctttaaatttgatgtaaga
aaaggaagcaaatttgaaggaaaacttaaaccaaatgtacgatacgcacaatcaactaag
cttgatggtgttcgatcagtagtattagttaatgataaaggtgttcaaatctttggtcgc
agtggaaaaacaattgatggactgaaagagattgaagtattatttaataaatactatgaa
caaacaaatactcctataatgtttgatggtgaattacttgcgattgatgaaactgaaagt
attcctaacgatgaattattcagaattacttcaaaaatcttgagagttaaaggtgacaag
tcagacattaaatttgtgatgtttgataatatgcctttggaagagttttatgaagggaaa
tcaaagcttaaattcaaagaacgtagagataacttgttagcattctatgaacaattaaaa
gtgattgatccaaaagttattgatattgtacctattcattatatcggtaatgacatggct
gaaattcaatctgtacaaaagaaattggaagacaatggctttgaaggttcaatgttagat
gaaattgaagcttattatgaagcaaaaagaactaaatctttattaaagtttaagactttc
cataccgttgatttacgctgcttacgtgtagaggaacatgttcgaggtaacaaggtagga
aacatcgtagtagactataaaggttatgagttaggtgtaggttcaggtttctcagataaa
gatagaaagttattctgggaacaaaaagacttaattgaaggtaaaatcgttgagattagc
tattttgaagaaagtaagaatgataaaggtggggaaagtttgaggttccctgtattcaaa
atggtaagagatgataaagatgaagtaagtttaaattaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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