KEGG   Serratia sp. SCBI: SERRSCBI_03590
Entry
SERRSCBI_03590    CDS       T03314                                 
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sers  Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:sers00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sers03009]
    SERRSCBI_03590 (rumA)
Enzymes [BR:sers01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     SERRSCBI_03590 (rumA)
Ribosome biogenesis [BR:sers03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SERRSCBI_03590 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_25 PCMT RrnaAD MTS Met_10 Cons_hypoth95 Methyltransf_11 CMAS FtsJ Methyltransf_23 DHDPS Ribosomal_L22 Methyltransf_4 DOT1
Other DBs
NCBI-ProteinID: AIM20344
Position
811128..812477
AA seq 449 aa
MAQFYSPKRRVTTRQSSQIFTVTVSDLDPFGQGVARHDGKAVFVPGVLPGEQAEIQLTED
KRQFAKGKLKRLLSRSPQRVEPRCPHFGVCGGCQQQHADEALQQQSKAAALVRMIARETG
VTPQQEPVIAGPEYGYRRRARLSLAWQPKLQRLMMGFRQAASSELVAVEHCPVLRPELEQ
LLAPVRACLSGLQAVRRLGHVELVLADNGPLLVLRHLDALKEADRQALLAFGEREKVAVY
LAPDSDRVEKLCGETPYYQVDGLRLDFSPRDFIQVNDAVNQQMVAQALEWLDIQPNDRVL
DLFCGMGNFTLPLARRAAAVVGIEGVATLIANGQYNAHKNKLNNASFFHENLEDDVERQP
WAAQGFDKVMLDPARAGAAGVMSHIVKLAPARVVYVSCNPTTLARDSKVLLNAGYRLARV
RMLDMFPHTGHLESMALFINERAPEVAAK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggcgcaattctactctcccaaacgccgcgtgacgacccggcagagctcacaaatcttc
accgtgacggtgagcgatctcgatcctttcggccagggcgtggcgcgccacgacggcaaa
gcggtgttcgtgccgggcgtattgccgggcgagcaggcggaaatccagctgaccgaagac
aagcgccagttcgccaaaggcaagctcaagcgcctgctgagccgcagcccgcagcgggtg
gagccgcgctgcccgcatttcggcgtgtgcggcggctgccagcagcaacatgcggatgag
gcgctgcaacagcagagcaaggcggcggcgctggtgcgcatgatcgcccgcgaaaccgga
gtaaccccgcaacaggaaccggtgatcgccggcccggaatacggctatcgccgccgcgcc
cgtctgagcctggcgtggcagccgaagctgcagcgcctgatgatggggtttcgacaggcg
gcctccagcgagctggtggcggtggagcactgcccggtgctgcgcccggagctggaacag
ctgctggcgccggtgcgcgcctgcctgagcgggctgcaggcggtgcggcggctggggcat
gtggagctggtgctggcggataacggtccgctgctggtgctgcgccatctcgatgccctg
aaagaggcggatcgccaggcgctgttggcgtttggcgagcgggaaaaggtcgccgtttat
ctggcgcctgacagcgatcgggtggaaaaactgtgcggtgaaacgccgtattatcaggtt
gacgggctacgcttagacttcagtccgcgcgactttattcaggtcaatgacgccgtaaac
caacaaatggtggcgcaggcccttgaatggctcgacattcaacccaatgatcgggtgctg
gacctgttctgcggcatggggaatttcaccctgccgctggcgcgccgcgccgctgcggtg
gtgggcatcgaaggtgttgccacgctgatagcgaatgggcaatataatgcacataagaat
aagctgaataatgcgtcgttcttccatgagaatctggaggacgacgttgagcggcaacct
tgggcagcacaagggtttgataaggtgatgctggatcccgcccgcgccggtgcggccggg
gtgatgtcacacattgtaaaactggcgccggcgcgggtggtgtatgtttcctgtaacccc
accacgctggctcgcgacagcaaagtgctgttgaacgccggttatcgtcttgcgcgcgtg
cggatgttggatatgtttccgcacacggggcatcttgaatcaatggcgctgtttatcaac
gagcgcgcgccagaggtcgctgcaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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