KEGG T00627: SARI

Salmonella enterica subsp. arizonae: SARI_04667

Entry

SARI_04667 CDS T00627

Gene name

recD

Definition

exonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ses Salmonella enterica subsp. arizonae

Pathway

ses03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ses03440]

SSDB

Motif

Pfam:

AAA_30 Helicase_RecD AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 UvrD-helicase AAA_22 DUF2075 PhoH AAA_16 AAA_28 FtsK_SpoIIIE AAA_25 MukB SRP54 Herpes_Helicase T2SE CbiA AAA_29 NTPase_1 AAA_17 DUF4277 AAA AAA_18

Other DBs

NCBI-GI:

161506464

NCBI-GeneID:

5760476

Position

4568928..4570763

AA seq 611 aa
MTIQKRLLEAVEQKLLRPIDAQFALTVAGNDEPAVTLAAALLSHDAGEGHVCLPLSRLTL
TEEAHPLLVAWISETATPIDWKKRLLASAAVSCGDSPAPLILCGDRLYLNRMWCNERTVA
RFFNEVNQAIAVDEDQLSRILDALFPPTDEVNWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGAALRQLPLTDAQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGGGAQAASLRDSLCLLQKSYR
FGSDSGIGKLAAAINCGDRSVIRAVFQQGYSDIEKRTLQSSDDYAGMLDEALAGYGRYLR
LLHEKATPEAILQAFNEYQLLCALREGPFGVRGLNDRVEQAMVQQRKIQRHPHSRWYEGR
PVMIARNDSALGLFNGDIGIALDRGQGLRVWFAMPDGAIKSVQPSRLPEHDTTWAMTVHK
SQGSEFDHAALILPNQRSPVVTRELVYTAVTRARRRLSLYADERILAGAIVTRTERRSGL
STLFDEVSHIG

NT seq 1836 nt +upstreamnt +downstreamnt
atgacaatccagaagcggttactggaggccgttgaacaaaaactattacggcccattgat
gcgcagtttgctttaaccgtcgccggtaacgacgagcccgccgtgacgctggcggcagcg
ctgcttagtcatgacgcaggtgaaggtcacgtgtgtctgccgttgtcgcgtttaacgtta
acggaggaggcgcatcccttactggtcgcctggataagcgaaacggctacgccaattgac
tggaaaaaacggttactggcgtctgcggcggttagctgcggcgatagccccgcaccgtta
attctgtgcggcgatcgcctctacctgaatcgcatgtggtgcaacgagcgtacggttgcg
cgcttttttaacgaggttaaccaggccatcgccgtagatgaagatcagttatcccgtatt
ctggacgcgcttttccctccgacagacgaggtgaactggcaaaaggtggccgccgccgta
gcgctaactcgccgtatctccgtgatttcaggcggtcccggcaccggtaaaaccaccacc
gtcgcgaagctgctggcggcattaattcaaatggcggatggcgaacgttgccgtatccgg
ctggcggcgccgacggggaaagcggccgcccgcctgacggagtcgctcggcgcggcgttg
cgtcagcttcctcttaccgatgcgcagaaaaagcgtataccggaggacgccagtacgctg
caccgactgctaggcgcacagcccggcagccagcgattacgccatcatgcgggcaacccg
ctgcatctggacgtgctggtggtcgatgaagcgtcaatgattgatttgccgatgatgtca
cgtttgattgacgctctgccgccgcacgggcgggtcatttttcttggcgatcgcgatcag
ctggcatctgttgaggcgggcgctgtattgggcgatatttgcgcctatgtcaacgcaggg
tttacggcagaacgcgcccgacagctaagccgtctaacggggagcgccattccggctggg
ggcggagcgcaagccgcgtctctgcgcgatagcctctgtctgttgcaaaagagctaccgt
ttcggcagcgattccggcatcggaaagctggcggcggcgattaactgtggcgacaggtcg
gtaatccgggctgtctttcagcagggttatagcgatatagaaaaacgtacattacaaagc
agcgacgattatgccgggatgctggatgaagcgctggcgggctatggccgctacctacgg
ttgctgcatgagaaagcgacgccggaggcaatccttcaggctttcaatgagtatcagttg
ctttgcgcgctacgcgaagggccgtttggcgtgaggggattgaatgaccgcgttgagcag
gcgatggttcaacagcgaaaaattcagcggcatccgcattcccgctggtatgagggacgt
ccggtgatgattgcgcgcaacgatagcgcgttggggttatttaacggcgatattggaatt
gcgctcgatcgcgggcagggattgcgcgtctggtttgcgatgccggacggcgcgatcaag
tctgttcagcccagccgcctgccggaacatgacacgacctgggcgatgacggtacataaa
tcgcaggggtctgaatttgatcacgccgcgctgattttacccaaccagcgttcgccggtc
gtaacgcgggaactggtgtataccgctgttacgcgcgcgcggcggcgattatcgctgtat
gccgatgaacggattctggcaggcgcgattgtgacgcgtacggaacggcgcagcgggtta
tcgaccttatttgatgaagtcagtcatatcggataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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