KEGG   Saccharothrix espanaensis: BN6_13500
Entry
BN6_13500         CDS       T02404                                 
Name
(GenBank) putative DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
sesp  Saccharothrix espanaensis
Pathway
sesp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sesp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN6_13500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sesp03400]
    BN6_13500
Enzymes [BR:sesp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BN6_13500
DNA repair and recombination proteins [BR:sesp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BN6_13500
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS TetR_C_25
Other DBs
NCBI-ProteinID: CCH28676
UniProt: K0JS69
Position
1418395..1419198
AA seq 267 aa
MPEGHTLHRLARLHRRRYVGAPVAVTSPQGRFHASTVDGRVLLRAEAHGKHLFHVYGPDA
TVHVHLGLYGTFSEYPHPVVEPVGQVRMRLVGPTHWTDLRGPTRCEVLTDVEVAALRARL
GPDPLRRDARPDLAFARIAKSRKSIGVLLMDQDVIAGVGNVYRAEVLFRHGLHPLTPGNK
VDRALWDLMWADLVVLMRHGVKVGRIDTVRPEHLPAATGRAPREDRHGGEVYVYRRTGMP
CLVCGTPVAMADLAARNLYWCPGCQPE
NT seq 804 nt   +upstreamnt  +downstreamnt
gtgcctgagggccacaccctgcaccggctcgcccggctgcaccgccgccggtacgtgggc
gcgcccgtcgcggtcaccagcccgcagggccggttccacgcgtccactgtggacggacga
gtgctgctccgcgcggaggcgcacggcaagcacctgttccacgtctacggaccggacgcc
accgtgcacgtccacctgggcctgtacggcacgttcagcgagtacccgcacccggtcgtc
gagccggtcggccaggtccggatgcgcctggtcggtccgacgcactggacggacctgcgc
ggacccacccggtgcgaggtgctgaccgacgtcgaggtggccgcgctgcgcgcccggctc
ggcccggacccgctgcgccgcgacgcgcgtcccgacctcgcgttcgcccgcatcgccaag
tcccgcaagtcgatcggcgtgctgctgatggaccaggacgtcatcgcgggcgtcggcaac
gtctaccgcgccgaggtcctgttccgccacggcctgcacccgctgacgccgggcaacaag
gtcgaccgcgcgctgtgggacctgatgtgggcggacctggtggtgctgatgcgccacggc
gtgaaggtcggccggatcgacaccgtgcgccccgagcacctgcccgccgccaccggccgc
gccccgcgcgaggaccggcacggcggcgaggtctacgtctaccggcgcaccgggatgccg
tgcctggtctgcggcacgcccgtggcgatggccgacctggccgcccgcaacctgtactgg
tgccctggctgccaaccggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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