KEGG T02404: BN6

Saccharothrix espanaensis: BN6_24580

Entry

BN6_24580 CDS T02404

Definition

DNA polymerase LigD, ligase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

sesp Saccharothrix espanaensis

Pathway

sesp03410	Base excision repair
sesp03420	Nucleotide excision repair
sesp03430	Mismatch repair
sesp03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:sesp03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sesp03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sesp03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:sesp03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

433604276

NCBI-GeneID:

14346898

UniProt:

K0JWB5

Position

complement(2598503..2599669)

AA seq 388 aa
MTGLLPWSLGPTLKPIADNCRPRFGARVKNPFSAYAPPVDLPVMPPVRPMLAKAVREVPR
EPGLVYEPKWDGFRCVVFRDGDELELGSRNDRPLTRYFPEVADLLANGLPARCVVDGEVV
IVTPDGLSFDLLQLRLHPAASRVRKLAAETPASFVAFDLLALGDRDLTGVPFGERRALLA
EALTETPGLYLTPATDDPDVAQDWFTRFEGAGFDGVVAKRTDLPYEQDRRVMWKVKHERT
ADCVVAGYRTHKDGEGVGSLVLGLYDDEGTLHHVGVASSFTATRRRELVAELEPYRARAL
DDHPWGEWARLDAATPGAQSRWAPDKTLSWEPLRPELVAEVRYEHVQGTRFRHTARLVRF
RPDRTPDSCTYRQLEEVPPAELTEMFRP

NT seq 1167 nt +upstreamnt +downstreamnt
atgactggccttcttccgtggtcgttggggccaactctaaaacccattgcggacaactgt
cgccctcgattcggcgcgcgggtgaaaaacccgttctcggcttacgctcccccggtggac
ctgcccgtgatgccgcccgtgcgcccgatgctggccaaggccgtgcgcgaggtgccccgc
gagcccggactggtctacgaaccgaagtgggacggcttccggtgcgtggtgttccgcgac
ggcgacgagctggagctcggctcccgcaacgaccgcccgctcacccggtacttccccgag
gtcgccgacctgctcgcgaacgggctgccggcgcggtgcgtggtggacggcgaggtcgtc
atcgtcaccccggacgggctgagcttcgacctgctccaactgcgcctgcacccggccgcg
tcccgggtgcgcaagctggccgccgagacgcccgcgtcgttcgtggcgttcgacctgctc
gcgctcggcgaccgcgacctgaccggtgtgccgttcggggagcgccgcgcgttgctggcc
gaagccctgaccgagacgcccggcctctacctgacgccggcgaccgacgacccggacgtc
gcgcaggactggttcacccggttcgagggcgcggggttcgacggcgtggtcgccaagcgc
accgacctgccctacgagcaggaccgccgggtgatgtggaaggtcaagcacgaacgcacc
gccgactgcgtggtggcgggctaccggacgcacaaggacggcgagggcgtcggctcgctg
gtgctgggcctgtacgacgacgagggcaccctgcaccacgtgggcgtggccagcagtttc
accgccacgcgacgacgggagttggtggccgagctggagccgtaccgggcccgcgcgctg
gacgaccacccgtggggcgagtgggcccggctcgacgccgccacccccggcgcgcagagc
cgttgggccccggacaagacgctgtcgtgggagccgctgcggccggaactggtggccgag
gtgcgctacgagcacgtccagggcacgcggttccggcacaccgcccggctggtccgcttc
cgccccgaccggacgccggactcgtgcacctaccggcagctcgaagaggtgccgccggcc
gagctgaccgagatgttccgaccatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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