KEGG   Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_16465
Entry
CFSAN001921_16465 CDS       T02737                                 
Name
(GenBank) RNA helicase
  KO
K03579  ATP-dependent helicase HrpB [EC:5.6.2.6]
Organism
setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:setc00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    CFSAN001921_16465
Enzymes [BR:setc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CFSAN001921_16465
SSDB
Motif
Pfam: HrpB_C DEAD Helicase_C AAA_22 HA2_N DUF2732
Other DBs
NCBI-ProteinID: AGQ69010
Position
complement(3346780..3349254)
AA seq 824 aa
MLQCGAKKVNPVEPFVTSLPVAAVLPELLTALKIAPQVLLSAPTGAGKSTWLPLQLLQQG
PVAGKILLLEPRRLAARNVAQRLAEALNEKPGETVGYRMRAQSCVGPRTRLEVVTEGVLT
RMIQRDPELRGVGLVILDEFHERSLQADLALALLLDIQQGLRDDLRLLIMSATLDNDRLC
QRLPDAPTIVSEGRAFPVERRYQPLAAHLRFDEAVAMATAELLRNENGSLLLFLPGVGEI
QRVHEHLASRVGSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAETSLTIEGIR
LVVDSAQERVARFDARTGLTRLVTQRISQASMTQRAGRAGRLAPGICLHLLAKEQAERAA
AQSDPEILHSDLSGLLMEVLQWGCHDPASLFWLDRPPEVNLQAARRLLLMLGALEGERLS
ARGRKMAAMGNDPRLAAMLVNAGEGDSAATAAMLAAILEDPPRGGGTDLSVVFSRRQPGW
QQRSQQLLKRLQVRNGEPDSALIMPLLARAFSDRIARRRGQEGRYQLANGMGAMLDADDA
LGRHEWLIAPLLLQGSASPDARILLAQPLDIASLIQACPDLLRQSDTVEWDEAQGTLKAW
RRMRIGQLTVSVQPLAKPSEEELHQAMLNGIRDKGLSVLNWTPEAEQFRLRLHCAAKWLP
EYDWPAVDEASLLATLENWLLPHMTGVQSLRGLKSLNVNQALRGLLDYAMLQRLDSELPG
HYTVPTGSRITIRYHEDNPPALAVRMQEMFGEAKTPTIAQGRVPLVLELLSPAQRPLQIT
RDLSAFWQGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgctacaatgcggcgcaaagaaagttaaccccgtggagccgtttgtgacgtcattgccc
gttgccgccgtattgcctgaattgttgacagccctaaaaatcgcgccgcaggttttgttg
tccgcgcctaccggggcggggaaatccacctggctgccgttgcaactcctgcaacagggg
ccggttgctggaaaaatcctcctgcttgaaccgcgtcgtctggcggcgcgtaatgtcgca
cagcgtctggcggaagcgttgaatgaaaagcctggcgaaacggtaggttaccggatgcgc
gcgcaaagctgcgtggggccgcgtacccggctggaagtggtgaccgaaggcgtattgacc
agaatgattcagcgcgatcccgaattacgcggcgtggggctggtgatactggatgaattt
catgagcgcagtttacaggcggatttagcgttggcgctgttgctggatatccagcaaggg
ctccgtgacgatctcaggctgttaatcatgtctgcgacgctggataacgacaggctttgt
cagcgactgcctgatgcgccgacgatcgtctcggaggggcgcgcgttcccggtggagcga
cgttatcagccgcttgcggcgcatttgcgttttgatgaagccgtcgcgatggcgacagcg
gaactgctgcgcaatgaaaacggttcgctgctgctatttttacccggcgtaggcgaaata
cagcgcgttcatgaacatctggcgtcgcgggtagggagcgatgtcctgctttgtccgctg
tatggcgcattgtctctggaagcgcaacgcaaagcgattgttccggcacccgccgggatg
cgtaaagtggtgttggcgactaacattgccgaaaccagtttgacgattgaagggattcgt
ctggtcgtcgatagcgctcaggagcgcgtggcgcgatttgacgcgcgaacgggactgacg
cggctggttacgcagcgtatcagtcaggcatcaatgacgcagcgcgcggggcgcgccgga
cgactggcgccgggtatctgtttacatctgctggccaaagaacaggcggagcgggcggcg
gcgcaaagcgatccggaaatcttacacagcgacctttccggtttattgatggaggtgttg
cagtggggatgtcacgatccggcatcgcttttctggctggacaggccgccggaggtgaat
cttcaggccgcccgccgtttattattgatgttaggcgcgctggagggcgagcggttaagc
gcgcggggccggaaaatggcggcaatgggtaacgatccgcgcctggcggcgatgttagtc
aacgccggcgagggcgatagcgccgccactgccgccatgctcgcggccatccttgaggac
ccgccgcgcggcggcggtacggatttaagcgtagtattttcgcggcgacagccgggctgg
cagcagcgtagccagcagcttttaaaacggctgcaggtgcgtaatggcgagccggatagc
gcgcttattatgccgctgttggccagagcgtttagcgaccgcatcgcgcggcgtcgtggt
caggaagggcgctatcagttagccaatggtatgggcgcgatgttagatgcggatgacgcg
ttgggacgtcatgaatggctgatcgcgccgctgttactgcaaggtagcgcctcgccggac
gcccgaatattgttggcgcagccgctggatattgcctcgctgattcaggcgtgtcctgat
ttactgcgccagtccgacacggttgaatgggacgaggcgcagggaacgttgaaagcatgg
cgcagaatgcgtattggacagttgacggttagcgttcagccactggcgaagccgtctgaa
gaggagcttcatcaggcgatgctgaacggcatccgcgataaaggtctgtccgtccttaac
tggacgccggaagcggagcagttccgtctgcgtctgcactgtgcggcgaaatggctgccg
gaatatgactggcctgccgtggatgaggcgtcgctgctggcgactctggaaaattggttg
ctgccgcacatgacaggcgtacagtcgttacgagggctaaaatccctgaacgttaatcag
gcgttacggggactgcttgactatgccatgctgcaacgtctggatagtgaactgcctggg
cattacactgtgccgacgggaagccgaataacgattcgttatcatgaagataacccgccc
gcgctggcggtcagaatgcaggaaatgtttggcgaagcgaagaccccaaccatcgctcag
ggccgcgtgccgctggtgctggaactgctttcgccagcgcagcgaccgctacagattacg
cgcgatttaagcgctttctggcagggggcgtatcgcgaagtgcaaaaagagatgaagggc
cgttaccccaaacatgtctggccggacgatccggcgaatacggccccaacgcggcgcacg
aagaagtattcgtga

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Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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