KEGG   Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_04555
Entry
STU288_04555      CDS       T02639                                 
Name
(GenBank) ATP-dependent RNA helicase HrpA
  KO
K03578  ATP-dependent helicase HrpA [EC:3.6.4.13]
Organism
setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:setu00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    STU288_04555
SSDB
Motif
Pfam: DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 AAA_19 nSTAND3 T2SSE NACHT PhoH AAA_16 ResIII
Other DBs
NCBI-ProteinID: AGK08521
Position
complement(946610..950455)
AA seq 1281 aa
MLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPV
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
NRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTLIIDEA
HERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTE
VLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFV
NLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
REIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
WGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFY
DQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
RLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
PAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDK
NKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVK
AWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
NPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERI
LTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQ
LGTPYPISDKRILQAMDQITA
NT seq 3846 nt   +upstreamnt  +downstreamnt
atgctgcgcgacaaacagcgctttgcgcgccgcctgcatggcgtaaagaaagtaaaaaat
cctgatgcgcaacaggccattttccagacgatggcgaaagaaattgaacaggctgcggcg
caggtcgccctccgcgaagcggcgcgcccctcaatcacttatccgcaaaatttgcctgtt
agccagaagaaacaggacattctggaagcgatccgcgatcatcaggtggtgatcgtggca
ggggaaaccggttccggtaaaaccacccagttgccgaaaatttgtatggaactgggacgc
ggaattaaaggacttattggacatactcaaccgcgtcgtctggcggcgcgcaccgtcgct
aaccgcattgccgaagagttgcaaacggagcctggcggctgcatcggctataaagttcgt
ttcagcgatcatgtcagtagcaacaccatggtcaaactgatgacggacggtatcctgctg
gcggaaatccagcaggacaggctattgatgcagtatgacaccctcattattgatgaagcg
catgaacgcagcctgaatattgacttcttgctcggctatctgaaagaacttctgccgcgt
cgccccgatctgaaagtgattattacctctgcgaccatcgacccggaacgcttctcgcgc
cactttaataacgcgccgattatcgaagtctctggccgaacgtatcccgtagaagttcgt
tatcgccccattgtggaagaggctgacgacactgaacgcgatcagctacaggcaattttc
gatgctgtcgatgaactggggcgtgaaagtcccggcgatattctgatttttatgagcgga
gagcgggaaatccgcgataccgccgacgccctgaacaagctgaacttacggcataccgaa
gtgttgccgctgtatgcacgcttgtcgaacagcgaacagaaccgcgttttccagtcgcac
agcggacgccgtatcgtgctggcgactaacgtggcggaaacctcgctgacggtgccgggt
atcaagtatgtgatcgatcctggcactgcgcgcatcagccgctacagctaccgcactaaa
gtgcagcgcctgccgattgaaccgatctcacaggcttccgccaaccagcgtaaagggcgt
tgcgggcgcgtatcggaagggatttgcattcgtctgtattcggaagatgactttttgtca
cgtccggaatttaccgacccggaaattctacgtaccaacctggcgtcggttattttgcag
atgaccgccctggggctgggtgacattgccgccttcccgtttgtcgaagcgccggataag
cgcaatattcaggatggcgtgcgtttgttggaagagctgggggcgattaccgccgacgaa
cagcaaacggcatataagctgacgccactgggccgacaattatcccagttgccggtcgac
ccgcgcctggcgcgtatggttctggaagcgcaaaaacatggctgtgtgcgcgaagcgatg
atcattacttccgcactctctattcaggatccgcgcgagcgcccagtggataagcagcag
gcttccgatgagaaacaccggcgtttccatgataaggaatccgattttctggcgtttgtt
aacctgtggaattacctcggcgagcaacaaaaggccctgtcgtcgaatcaattccgccgt
ctgtgtcgcaccgactatctgaactatttacgcgtgcgtgagtggcaggatatctatacc
caactgcgtcaggtggtaaaagaactggggattccggtaaacagcgaacccgcagagtac
cgggaaattcacgttgcgttgttaacgggactgttgtcgcatatcgggatgaaagatgcc
gataaacaagagtacaccggcgcgcgtaacgcccgattctctattttccccggttccggt
ttattcaaaaaaccgccgaaatggacaatggtcgcagaactggtggagaccagccgcctg
tgggggcgcatcgctgcccgcattgagccagaatgggtggaaccggtagcccagcacctg
attaaacgttcatatagcgaaccgcactgggagcgggcgcaaggcgcggtgatggcgacg
gaaaaggttactgtctacggtctgccgattgtcgccgcgcgcaaagtgaattacagccag
attgacccggcgttgtgtcgcgagttgtttatccgccatgcgctggtggagggggactgg
caaacccgtcacgccttcttccgtgagaatctaaaattgcgtgcggaagtcgaggaactt
gagcacaaatctcgccgccgcgatatcctggtggatgacgataccctgtttgagttttat
gaccagcgtattagccatgacgttatttccgcccgccactttgatagttggtggaaaaaa
atcagccgcgagacgccggatctgctcaactttgaaaaaagtatgctgattaaagaaggc
gcggaaaaaatcagcaaactggattacccgaacttctggcaccagggcaatcttaagctg
cgtttgagctatcagtttgaaccgggcgcggatgctgacggcgtgaccgtccatattccg
ttgccgctacttaaccaggttgacgagagcggttttgaatggcagatcccagggctgcgc
cgtgaattagttattgcgctgattaaatcgttgccaaaaccggtacgtcgcaactttgtt
ccggcgccaaactatgctgaagcgtttttaggtcgcgtaacgccgctggagctgccgctg
ctggacgctctggagcgtgaactgcgccggatgaccggcgtcacggtcgatcgggaagac
tggcattgggatcaggtgcccgagcatctgaaaatcacgtttcgcgtggtgaatgacaaa
aacaagaaactgcaggaagggcgttcgctcgccgagcttaaaaatgcgctgaaaggcaaa
gtgcaggagacgctctcggcggtggcggatgacggcatcgagcagagcgggctgcatatc
tggagtttcggcgagctgccggaaagctacgaacagaaacgcggtaattataaagtgaag
gcgtggccggcgttagtggatgagcgtgacagcgtcgctatcaaattgtttgataatccg
ctggaacaacaacaggcgatgtggtgcggtttacgccgtctgttgttgctcaatattcct
tcaccgattaagtatctgcatgagaaattgccgaataaagccaagctggggctgtacttt
aacccgtacggcaaagtactggagttgattgatgactgtatcgcctgcggggtagataag
ctgatagatgccaacggcggaccggtgtggagcgaagcaggtttcaccgcgctgcacgaa
aaggtacgcgccgagctgaatgatactgtggtggatatcgcgaagcaggtcgagcggatc
ctgacgaccgtattcaatatcaataagcgtctgaaagggcgggtggatatgagcatggcg
ttggggctttccgatatcaaggcgcagatgagcggtctggtataccgtggttttgtgact
ggcaacggctttaaacgtctcggcgatacgctgcgttatctgcaggcaattgaaaagcgg
ctggagaaactggctgtcgatccgcaccgcgatcgggcgcaaatgctgaaagtcgaaagc
gtccagcaggcgtggcaacaatggataaataaattgcctccagcgcgtcgcgaagatgat
gatgttaaagagatccgttggatgattgaagaactgcgtgtcagttatttcgcccaacag
ctcggtacgccttatcctatttccgataagcgtattttacaggccatggatcagattacg
gcctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (20)   

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