KEGG   Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_05915
Entry
STU288_05915      CDS       T02639                                 
Symbol
aspS
Name
(GenBank) aspartyl-tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:setu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    STU288_05915 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:setu01007]
    STU288_05915 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:setu03016]
    STU288_05915 (aspS)
   03029 Mitochondrial biogenesis [BR:setu03029]
    STU288_05915 (aspS)
Enzymes [BR:setu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     STU288_05915 (aspS)
Amino acid related enzymes [BR:setu01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   STU288_05915 (aspS)
Transfer RNA biogenesis [BR:setu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    STU288_05915 (aspS)
 Prokaryotic type
   Other AARSs
    STU288_05915 (aspS)
Mitochondrial biogenesis [BR:setu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    STU288_05915 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AGK08791
Position
complement(1209867..1211639)
AA seq 590 aa
MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA
SELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLDANHVNTEEA
RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
APQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLK
SVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKG
LDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGKDLSLT
DEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAYDMVING
YEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM
LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKKAENN
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgcgtacagaatattgcggacagctacgtctgtcccacgtggggcagcaggtgactctg
tgtggttgggtcaaccgtcgtcgtgatcttggcagcctgatctttatcgatatgcgcgac
cgcgaaggtattgtgcaggtgttcttcgatccggatcgtgcggacgcgttaaagctggcc
tctgaactgcgtaatgagttctgcattcaggttacgggcaccgtgcgtgcgcgtgacgcg
aaaaacgtcaatgcggatatggcgaccggcgaaattgaagtgctggcgtcctctctcact
atcatcaaccgcgcagactcactgccgcttgacgctaaccacgttaataccgaagaggcg
cgtctcaagtaccgctatctggatttacgtcgtccggaaatggcgcagcgcctgaaaacc
cgcgccaaaattaccagcctggtgcgtcgttttatggacgatcacggtttccttgatatt
gaaacgccgatgctgaccaaagccacgccggaaggcgcgcgcgactatctggtgccttcg
cgcgtgcacaaaggtaaattctacgcgctgccgcagtcgccgcagctgttcaaacagctc
ctgatgatgtccggtttcgaccgttactatcagatagtcaaatgcttccgtgatgaagac
ttacgtgctgaccgtcagccggagtttactcagatcgacgtcgagacctccttcatgacc
gcgccacaggtgcgcgaagtgatggaagcgctggtgcgccatttatggctggaagtgaaa
ggcgtggatctgggggatttcccggtcatgacgtttgccgaagcggaacgtcgttacggt
tccgacaaaccagacctgcgtaacccgatggaactggtagatgtcgctgacctgctgaaa
tcggtagagttcgcggtcttcgcgggcccggctaacgatccgaaaggccgcgtggcagcg
ctgcgtgtgcctggcggcgcacagcttagccgtaagcagatcgacgattacggtaacttt
gttaagatctacggcgcgaaaggactggcgtatatcaaagttaacgagcgcgcgaaaggt
ctggacgggattaacagtccggtggccaagttcctgaccgccgacatcgtcgaggctatc
cttgaacgtaccggcgcgcaggacggcgacatgatcttcttcggcgcagataacaacaaa
gtggttgccgatgcgctgggcgcgctgcgtctgaaactgggcaaagacctgagcctgacc
gacgaagacaaatgggcgccgctgtgggtgattgacttcccgatgttcgaagacgacggc
gaaggcggtctgaccgcgatgcaccatccgttcaccgccccgcgtgacatgacggcgtct
gaactgaaaactgcgccggaaggagccgtcgctaacgcttacgatatggtgattaacggc
tatgaagtgggcggcggttcggtgcgtattcacaacggtgaaatgcagcaaaccgtattt
ggtattctcggtatcaatgagcaggagcagcgcgagaagttcggcttcctgttggatgcg
ttgaaatacggtacgccgccgcacgcgggcctggcgtttggtctggaccgtctgaccatg
ctgttgaccggcaccgacaatattcgtgatgttatcgccttcccgaaaacgaccgccgcc
gcgtgtctgatgaccgaagcgccgagtttcgccaacctggcagcgttgacggagttgggt
attcaggttgtgaagaaagccgagaataactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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