KEGG T00877: SEQ

Streptococcus equi subsp. equi 4047: SEQ_0394

Entry

SEQ_0394 CDS T00877

Definition

RecD/TraA family helicase

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

seu Streptococcus equi subsp. equi 4047

Pathway

seu03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:seu03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 AAA_22 PhoH Herpes_Helicase AAA_14 UvrD-helicase UvrD_C AAA_12 Helicase_RecD T2SE AAA HHH_5 UPF0079 AAA_28 Zeta_toxin AAA_25 5_3_exonuc NTPase_1 DUF258 DUF2075 AAA_17 AAA_5 AAA_16 NACHT AAA_29 AAA_33 AAA_23

Other DBs

NCBI-GI:

225869837

NCBI-GeneID:

7697403

UniProt:

C0MAV1

Position

complement(374041..376440)

AA seq 799 aa
MEHFFTGTVDRIIFDNASNFFKILLLAIEDTDSDFDEADIVITGTMAEIIEGEAYTFWGE
LTQHPRYGQQLRLSRYQKAKPTSAGLVSYFSSEHFKGIGQKTAEKIIALYGNNPIDEILK
NPSRLNEISSLSKANREAFVAKLKANYGTEQVIAALADLGLANRFAFQLFDKYKEEAVHI
VKDNPYQLIEDIQGFGFKLADSLAEQLGIESASPKRFRAALLHCLLEQSIKRGDTYIQAR
ELLALTISLLEDTRPVECDPAIVANQLTQLIDEGKVMTIGTRVFDSSLYYAEDGIQKHLT
RLLQQPLTKEPSQDTIDQEIQAIQEELAITYDKIQKQAISQALTSKVFILTGGPGTGKTT
VIRGILQAYASLYQIDLKQKDIPIILAAPTGRAARRMNELTGLASATIHRHLGLNGDNDY
QAMEDYLDCDLLIVDEFSMVDTWLANQLLTAINSNTQLIIVGDSDQLPSVGPGQVLADLL
KVDRIPHITLDKIFRQSEESTIVDLANHIRQGILAPDFCQKKADRSYFEAQAPFIPGMMT
KIVQAALKSGIPAEEIQILAPMYKGLAGINSLNQLMQNLLNPLANQTEFLFNETAFRKGD
KVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDEIIMDFDGTEIVYPRNEWLKITLAY
AMSIHKSQGSEFQVVILPVTRQSGRLLQRNLIYTAITRSKSKLIMLGEIAAFEEAIKKEG
DKRHTYLVQRLQVAEADDHTAAASVKESNQSSLSVMPATSPQKEQEQPLYLLTPHNFLAI
DPMIGLTEDDMLTFFKKKS

NT seq 2400 nt +upstreamnt +downstreamnt
atggaacacttttttacaggcactgttgaccgaattatctttgacaatgcgtcaaatttt
ttcaaaattctattactggctatagaggatactgatagtgattttgatgaagctgacatt
gtcattacaggcactatggctgagatcatagagggcgaagcctataccttttggggtgag
ctgacccagcacccaaggtatggtcagcagctgcgcctgagccgctatcaaaaggctaag
cccacctcagcaggtctcgttagctatttttccagtgagcatttcaagggcattgggcaa
aaaacagctgagaaaatcattgccctttacggtaataatcctattgatgagattttaaaa
aatcccagtcggcttaatgagatctctagcctttctaaggctaatcgtgaagcctttgtg
gcaaagcttaaagccaattatggcactgagcaggtgattgctgccttggctgatctagga
ctggccaatcgctttgcctttcagctatttgacaaatacaaggaagaggctgttcatatc
gtcaaggacaatccttatcaactcattgaggacattcaaggctttggctttaagctggct
gatagcttagctgaacagctaggaattgagagtgcctctcccaagcgctttcgtgcggct
ctgctgcattgcctgttggagcaatccatcaagcgaggcgacacctatatccaggcacgt
gagcttttggcgctgaccattagcctattagaggacacaaggccagtcgaatgcgaccca
gctattgtcgctaatcagctaacccagctcatcgacgagggcaaggttatgactattggc
acgcgtgtttttgacagcagcctttattatgccgaagacggcattcaaaagcatctgaca
cgcttactacagcagcctctgactaaggagcctagtcaagataccattgaccaagaaatc
caagccatacaagaggagcttgctataacctatgacaagatccaaaagcaggccatcagc
caggcactgaccagcaaggttttcattctaacaggaggcccaggcacaggaaagacaacc
gttatcaggggcattttacaggcctatgccagcctgtaccagattgacctgaaacaaaag
gatattcccattatcctagcagctccaactggtcgagccgctcgtcgtatgaacgaatta
accggtctagcaagcgcaactattcaccgccatcttgggttaaacggagacaatgattac
caagcaatggaggattatttagactgtgatttgctgattgttgatgaattttccatggtt
gatacctggctggccaatcagctattaacagccatcaattctaatacccagctgatcatc
gtaggagatagcgaccagctgccttctgtcggtcctggacaggtactagctgacttgcta
aaggttgatcggatccctcacattacccttgacaagatttttcgccaatcagaggagtca
accattgttgatttagccaaccacatacgccaaggcattcttgctcctgatttttgtcag
aaaaaggctgatcgctcctactttgaagcgcaagcgccattcattcccggcatgatgaca
aagatcgtacaggctgccctaaaaagtggcatcccagctgaggaaattcaaatcctagcc
cctatgtacaaaggactagcaggcatcaacagcctcaaccagctcatgcaaaacctcctg
aatcctctagctaatcagacagaatttctctttaacgagacggcctttcgtaagggagac
aaggtacttcaccttgtcaatgacgctcagcttaatgtcttcaatggtgatattggctat
atcacagacctcattccagccaaatataccgaatccaagcaggacgaaatcatcatggac
tttgatggcaccgagatcgtctacccaagaaatgaatggttaaaaatcacccttgcctat
gccatgagcattcacaaatctcaaggcagtgaatttcaggtggtaatcctgcctgtcacc
cgtcagagtggtcgacttctgcaaagaaacctcatctacactgccatcaccagatcaaaa
agcaagctcatcatgctcggagaaatagccgcctttgaagaggcaatcaaaaaagaaggt
gacaagcgacacacctatctcgtacaaaggcttcaagtggctgaagctgatgaccataca
gcagctgcttcagtaaaggaatcaaatcagtctagcctatctgtaatgccagctaccagc
ccacaaaaggaacaagagcagcctctttatctgctcacccctcataatttcctagctata
gaccccatgattggtctaaccgaagatgatatgttaaccttttttaagaaaaaatcataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (32)   
   Pfam (32)   
All databases (41)   

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