KEGG T01715: STMMW

Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_32821

Entry

STMMW_32821 CDS T01715

Definition

polynucleotide phosphorylase

Orthology

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

sev Salmonella enterica subsp. enterica serovar Typhimurium D23580

Pathway

sev00230	Purine metabolism
sev00240	Pyrimidine metabolism
sev03018	RNA degradation

Module

sev_M00394

RNA degradosome

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:sev00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:sev00240]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:sev03018]

SSDB

Motif

Pfam:

RNase_PH PNPase RNase_PH_C S1 KH_1 KH_3 KH_2 S1_2

Other DBs

NCBI-GI:

378446669

NCBI-GeneID:

11762305

UniProt:

C9XHK0

Position

complement(3471671..3473806)

AA seq 711 aa
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVAA
GTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVND
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE

NT seq 2136 nt +upstreamnt +downstreamnt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaact
ggcatgatggcgcgtcaggccactgccgctgttatggtaagcatggatgacaccgccgta
ttcgttaccgttgtcggccagaaaaaagccaagccaggccaggacttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgttaacgaagtgcaggttatcgcgaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtggcgatgatcggcgcatccgctgcgctgtcgctg
tccggcattccgttcaacggcccaatcggcgcggcgcgcgtaggttacatcaatgaccag
tacgtgctgaacccgacccaggacgagctgaaagaaagcaagctggacctggtggctgcc
ggtaccgaagcggctgtgctgatggtggaatccgaagctgaactgctgagcgaagacact
atgctgggcgcggtggtattcggtcacgagcagcagcaggttgttatccaggcgatcaac
gatctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagccgtcaacgac
gcgttgaacgcgcgtgttgctgcgctggctgaatctcgtctgagcgacgcgtaccgcatc
accgataaacaagagcgctatgctcaggttgacgtaatcaaatccgaaaccatcgagcag
cttattgcagaagatgaaactctggatgctaacgagctgggcgaaatcctgcacgctatc
gagaaaaacgtggtgcgtagccgcgtactggcaggcgagccgcgtattgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgcactggcgtactgccgcgtactcacggttcc
gctctgtttacccgtggtgaaacgcaggcgctggttaccgcaactctgggtactgcccgt
gacgcgcaggtgcttgatgaactgatgggcgagcgtactgacagcttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccggacatggataaa
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggttcttcttctatg
gcttccgtgtgcggcgcttctctggcgctgatggacgctggcgtgccaattaaagccgcc
gtagcaggtatcgctatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attctgggcgacgaagatcacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgttgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggaacaggcg
atcaacgcgccgcgcggcgatatctctgaatttgcgccgcgtatccataccatcaagatc
agcacggacaagatcaaagacgtgatcggtaaaggcggttctgtgatccgcgcgctgact
gaagagaccggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcggcgacc
gacggtgaaaaagcgaaatacgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtcggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcgtttgttgcc
atcggcggcgggaaagaaggtctggttcacatctctcaaatcgcggataaacgtgtagag
aaagtgaccgactatctgcagatgggtcaggaagtcccggttaaggttctggaagttgac
cgccagggccgtgtacgtctgagcattaaagaagcaaccgagcagtctcaacctgcggct
gcgccggaagctccggcgagcgaacaggccgagtaa

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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