KEGG   Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_35660
Entry
STBHUCCB_35660    CDS       T01741                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sex  Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STBHUCCB_35660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sex03019]
    STBHUCCB_35660
Enzymes [BR:sex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     STBHUCCB_35660
Messenger RNA biogenesis [BR:sex03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     STBHUCCB_35660
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AEZ47188
Position
3471232..3472497
AA seq 421 aa
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccacaggtg
gttgaagcccttgaaaaaaaagggttttataattgtacgcccattcaggcactggccctt
ccgctaacgctggcgggtcgtgacgttgcagggcaggcgcaaaccggtaccgggaaaacg
atggcgtttctgacgtcaacgtttcattatttactttctcatcccgcgatcgacgatcgc
aaggtgaaccagccgcgcgcgctgatcatggcgccgacgcgtgaattagccgtacaaatt
cacgcagacgcggagccgctggcgcaagcgacaggcttaaaattaggcctggcttacggc
ggcgatggttacgacaagcagcttaaagtgctggaaagcggcgttgatattcttattggt
acgacgggccgattgatcgactacgccaaacaaaaccacattaacctcggcgccattcag
gtcgtcgtactcgatgaagccgatcgcatgtacgatttgggctttattaaagatatccgc
tggctgttccgtcgtatgccgccggctgcgcagcgtctgaacatgttgttctccgccacc
ctgtcttatcgggttcgcgagctggcgtttgaacagatgaacaacgccgaatatgttgaa
gtggaaccggagcaaaagaccggccaccgcattaaagaagagcttttctacccctctaat
gaagagaaaatgcgtttactgcaaacgctgatcgaagaagagtggccggatcgcgccatt
attttcgccaacaccaagcatcgttgcgaagatatctggggacatctggcggcagatggc
catcgtgttggtctgctgaccggcgacgtcgcgcagaaaaagcgcctgcggattctggat
gagttcacccgcggcgatctggatattcttgtggcgaccgatgtcgcggcgcgcgggttg
catatccccgccgtaacgcacgtctttaactacgatctgccagacgattgtgaagactat
gttcaccgtatcggtcgtaccggtcgcgctggcgccagcggacattccatcagcctggct
tgtgaagagtatgcgctgaatctgcccgctattgagagctatatcggccactcgattccg
gtcagcaaatacaatccggaagcgctcatgaacgatctgcccaagccgttgcgtctgacg
cgttcgcgtcctggcaatggtccgcgccgcgctggcgctccgcgtaatcgtcgtcgttca
ggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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