KEGG   Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_0410
Entry
SL1344_0410       CDS       T01724                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Pathway
sey00740  Riboflavin metabolism
sey01100  Metabolic pathways
sey01110  Biosynthesis of secondary metabolites
sey01240  Biosynthesis of cofactors
sey02024  Quorum sensing
Module
sey_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sey00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SL1344_0410 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SL1344_0410 (ribD)
Enzymes [BR:sey01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SL1344_0410 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SL1344_0410 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CBW16510
UniProt: A0A0H3N9Z3
Position
469330..470433
AA seq 367 aa
MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGEPHAEVHALRMAG
AKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGI
AVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGRTAMASGESQWITSPQARRDV
QRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENLRQPVRIVIDSQNRVTP
AHRIVQQPGETWIARTQEDSRAWPDAVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEA
GPGLAGALLQAGLVDELIVYVAPKLLGTQARGLCELPGLEKLADAPQFTFSEIRHVGPDV
CLHMVSA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaggatgagttttacatggcgcgagcgctcaaactggcgcagcgtggacgtttcacc
actcaccctaaccctaatgtcggctgtgtcattgttaacaatggcgacatcgtcggcgaa
ggttatcaccatcgcgccggagagccgcacgccgaggttcatgcgctgcggatggcgggc
gcaaaagccaaaggcgcaaccgcctatgtcacgcttgaaccctgtagccatcatgggcga
acgccgccatgttgcgatgcgctgattgcggccggcgtcgcgcgcgtggtcgccgcgatg
caggacccgaacccacaggtcgccgggcgtgggctgtatcgcctgcaacaggcgggtatt
gcggtcagccacgggttaatgatgagtgaagcggaggcgctcaataaaggcttcctcaag
cggatgcgtaccggattcccttatcttcagcttaaactgggcgcctccgtcgacggacgg
acggcgatggccagcggcgaaagccagtggatcacctcgccgcaggcccggcgtgacgtt
cagcgcttgcgtgcgcaaagccacgctatcttaaccagtagcgcgacggtattggctgac
gatccggccttgacggtgcgttgggcggagttagacgcctctacgcaggcgtcttacccg
caggaaaatctgcgccagccggtgcgaattgttatcgacagccaaaaccgggtaacgcct
gcgcatcgtattgtgcagcagcctggcgaaacgtggatcgcgcgtacccaggaagatagc
cgcgcgtggcccgatgcggttcgtactatcagcgtgccggcgcacaacggacatttggat
ctggttgtgctgatgatgcagttaggcaggcagcagattaatagcatatgggttgaagcc
ggaccgggactggcgggcgcgttgctgcaagccgggctggtggatgaactgattgtctat
gtcgcgcctaaattgttgggaacccaggcgcggggattatgcgaattgccggggcttgag
aagctcgccgacgcgccgcaatttaccttcagcgaaatacgtcatgtcggcccggatgtt
tgcctgcatatggtgagcgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system