KEGG   Streptomyces pratensis: Sfla_0436Help
Entry
Sfla_0436         CDS       T01647                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sfa  Streptomyces pratensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sfa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sfla_0436
Enzymes [BR:sfa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sfla_0436
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sfla_0436
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(503016..503876)
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALRDFLGDHLVGKEIARVLPLAISVLKTYDPPVTELEGADVSAVARHGKFLD
ITAGDLHLLIHLARAGWLQWKDGFPATPPRPGKGPLALRTVLTGGDGFDLTEMGTTKRLA
VHLVRDPAEVPGVARLGPDPLADSFDRDAFAAVLGGARRQIKGALRDQSLIAGIGNAYSD
EILHVAKMSPFKLTSALGDEDVTRLYDAMRTTLQDAVERSRGVAAGRLKAEKKSSMRVHG
RTGQPCPVCGDTVLEVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgccggaagtcgaagccctgcgggacttcctcggcgaccatctggtcggc
aaggagatcgcccgggtgctgccgctcgcgatcagcgtcctgaagacgtacgacccgccg
gtcaccgagctggagggcgccgacgtctccgccgtggcccggcacgggaagttcctcgac
atcacggcgggggatctccatctgctcatccacctcgcgagggccggctggctccagtgg
aaggacggctttcccgcgaccccgccgaggccgggcaaaggacccctcgccctgcgtacg
gtcctcacgggcggcgacggcttcgacctgacggagatgggcaccaccaaacgcctcgcc
gtccacctggtgcgcgaccccgccgaggtccccggcgtcgcgcgcctcggtccggacccg
ctcgccgactccttcgaccgcgacgcgttcgcggcggtgctcggcggggcacgccggcag
atcaagggagcactgcgcgaccagtcgctgatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacgtcgcgaagatgtcgccgttcaagctcacgtccgccctcggcgacgag
gacgtcacccgcctgtacgacgccatgcgcaccacgctccaggacgcggtcgaacgctcc
cgcggggtcgcggcgggccggctcaaggccgagaagaagagcagcatgcgcgtccacggc
cggacggggcagccctgccccgtctgcggcgacaccgtgctggaggtgtcgttcagcgac
tcctcgctccagtactgccccacctgtcagaccggcggcaagcccctcgccgaccgccgt
ctgtcccgcctgctcaagtag

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