KEGG   Streptomyces pratensis: Sfla_1727Help
Entry
Sfla_1727         CDS       T01647                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sfa  Streptomyces pratensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sfa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sfla_1727
Enzymes [BR:sfa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sfla_1727
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sfla_1727
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2110110..2110967)
Genome map
AA seq 285 aa AA seqDB search
MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG
KYLWVPLDEADSSLLGHLGMSGQLLVQPEDAVDEKHLRIRIRFDDALGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRALLDQSLISGVGNI
YADEALWRSRLHYERPTASLTRPRTAELLGHVRAVMREALDQGGTSFDSLYVNVNGESGY
FDRSLDAYGREDEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRIS
NT seq 858 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactgcccgaggtcgaagtcgtgcggcggggcctggaacgctggaccgccgga
cgcaccgtcgaggccgtcgaggtcctgcatccgcgtgcggtccgccggcacctcgccggc
ggcgccgacttcgcggcccggctgcgcggtctgcggttcggcacggcgatgcgccgcggc
aagtacctctgggtgcccctcgacgaggcggactcctcgctcctgggccatctcggcatg
agcggtcagctgctcgtgcagcccgaggacgccgtggacgagaaacacctgcgtatccgg
atccgcttcgacgacgcgctcggcaccgagctgcgcttcgtcgaccagcgcaccttcggc
gggctgtcgctgcacgacaacacccccgacggcctgcccgacgtcatcgcccacatcgca
cgcgaccccctcgacccggccttcgacgacgccgccttccacctcgcgctgcgtctgcgc
cgtacgacggtcaagcgggccctgctggaccagtccctgatcagcggcgtcggcaacatc
tacgccgacgaggcgctctggcgcagccggctccactacgagcggccgaccgcgagcctg
acgcgcccgcggacggcggagctgctcggccatgtccgggcggtgatgagggaggccctc
gaccagggcggtaccagcttcgacagcctgtacgtcaacgtgaacggtgagtccggctac
ttcgaccggtccctggacgcgtacgggcgggaggacgagccctgccgccgctgcggtacg
ccgatgcgccggcggccctggatgaaccgcagcagctacttctgcccgcgctgccagcgt
ccgccacggatctcctga

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