KEGG   Streptomyces flavogriseus: Sfla_5714Help
Entry
Sfla_5714         CDS       T01647                                 
Definition
DNA ligase D
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
sfa  Streptomyces flavogriseus
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:sfa03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sfa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sfa03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:sfa03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(6548151..6548705)
Genome map
AA seq 184 aa AA seqDB search
MDSESTRRFVVQIHDARRMHFDFRLEVDGVLKSWAVPRGPSDNPSDKRLAVPTEDHPLEY
REFEGVIPRNEQGSGTVIVWDQGTYRPTSHDLAGAPVPFAESLETGHATFWLDGAKLHGE
FALTRFHIDDEDGTRGPEAWLLIKANDRQAVHDRPGTPDPYHARSARTGRTLHQVAVAER
EGAG
NT seq 555 nt NT seq  +upstreamnt  +downstreamnt
gtggacagcgagagcacacggcgtttcgtggtgcagatccacgacgcccggcgcatgcat
ttcgacttccggctcgaggtggacggtgtcctgaagtcctgggcggtaccgcgtggcccg
tcggacaaccccagcgacaaacggctggccgtgccgacggaggatcatcctctggagtac
cgcgagttcgagggagtcatcccgcgaaacgagcagggcagcgggaccgtgatcgtgtgg
gaccagggcacctaccgcccgaccagccacgacctcgcgggcgcccccgtcccgttcgcc
gagtccctggagacaggacacgcgacgttctggctcgacggggcgaaactgcacggcgaa
ttcgccctcacccgtttccacatcgacgacgaggacgggacgcgcggcccggaggcctgg
ctcctgatcaaggcgaacgaccgccaggccgtccacgatcgcccgggaacacccgatccg
taccatgcccgctcggcccgcaccggccgcacgctgcaccaggtcgccgtggcggagcgg
gagggcgcgggctga
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