KEGG T02188: USDA257

Sinorhizobium fredii USDA 257: USDA257_c56060

Entry

USDA257_c56060 CDS T02188

Gene name

phoD2

Definition

alkaline phosphatase D (EC:3.1.3.1)

Orthology

K01113

alkaline phosphatase D [EC:3.1.3.1]

Organism

sfd Sinorhizobium fredii USDA 257

Pathway

sfd00627	Aminobenzoate degradation
sfd00790	Folate biosynthesis
sfd01100	Metabolic pathways
sfd01120	Microbial metabolism in diverse environments
sfd02020	Two-component system

Module

sfd_M00126

Tetrahydrofolate biosynthesis, GTP => THF

Class

Metabolism; Metabolism of cofactors and vitamins; Folate biosynthesis [PATH:sfd00790]
Metabolism; Xenobiotics biodegradation and metabolism; Aminobenzoate degradation [PATH:sfd00627]
Environmental Information Processing; Signal transduction; Two-component system [PATH:sfd02020]

SSDB

Motif

Pfam:

PhoD UCR_Fe-S_N TAT_signal

Other DBs

NCBI-GI:

398355414

NCBI-GeneID:

13068613

UniProt:

I3XE15

Position

complement(5819554..5821116)

AA seq 520 aa
MAAVRDTLTRRSFLLSTGAAGLVASSGLATPFYARGYGRPEFLHGVQSGDVDPQSGMIWT
RVDRPSRVVVEYSTTESFSSAIRLADIDATPQTDCAVKCRLDNLLPDQDIFYRFTATDLY
DGNRVSEPIVGRFRTAPLRRRSVRFVWSGDTAGQGWGIDEVGMKTYSTMRLHEPDFFIHS
GDTIYADNPIPDEIKLRDGGMWKNRIVTPEKRDVARTLEEYRGQWKYNLLDEHVRGLNAV
CPTFYQWDDHEVLNNWSASTDLRDDPRYPEKDVAVYASRAARAFHEMTPIRTLPTQPGRI
FRKIAYGPLLDVFFVDLRSYRGPNQGEGDAGLFGWRQTDWLKRELAASRATWKVIACDMP
IGLVVWDDYSRKRGSDAIANGDGGAPGGRETEFADLLRFIRDNGVDNIVWLTADVHYTAA
HHYDPSRAAFKDFLPFWEFVSGPLHSGTYGPKELDMTFGPEVRFIKASAGGADSNLPPSA
GLQFFGIVDVNGQTEQLTVRLMDRQDKELWRVTLDPAAVA

NT seq 1563 nt +upstreamnt +downstreamnt
ttggccgcagttcgagacacgctcacccggcgttcttttctcttatcgaccggcgccgcc
ggcctcgtggcgtcctccggccttgccacaccgttctatgcgcgcggctacgggaggccg
gaattcctgcatggcgtccagtccggcgatgtcgatccgcaatcaggcatgatctggacg
cgggtggaccgcccgtcgcgcgtcgtggtcgaatattcgaccaccgagagcttctcgagt
gccatccggcttgccgatatcgatgcgacgccgcagaccgattgcgcggtgaagtgccgg
ctcgacaatctgctgccggaccaggacatcttctaccgcttcaccgccaccgatctctat
gacggcaaccgcgtttccgagccgatcgtcgggcgctttcgcaccgcgcccttgcgccgg
cgttcggtgcgcttcgtctggtccggcgacacggccggtcagggctggggcatcgacgag
gttggcatgaagacctattcgaccatgcggctgcacgagccggatttcttcatccattcc
ggcgacacgatctatgccgacaacccaatccccgacgagatcaagcttcgcgacggcggc
atgtggaagaatcgcatcgtcacgccggagaagcgcgacgtcgcccgcacgctcgaggaa
tatcgcggccaatggaaatacaatctgctcgacgagcatgtgcgcggcttgaacgccgtc
tgcccgaccttctatcaatgggacgaccacgaagtcctgaacaactggtcggcctccacc
gaccttcgcgacgatccgcgctatccggagaaggacgtggccgtctatgcgtcccgtgcg
gcgcgcgccttccacgagatgacgccgatccgcaccctgccgacccagccggggcgcatc
ttccgcaagatcgcctatggtccactgctcgacgtcttcttcgtcgatctgcgttcctat
cgcggccccaaccagggggagggggatgccgggcttttcggatggcgacagaccgattgg
ctaaagcgtgagctcgccgcctcgcgcgccacctggaaggtgatcgcctgcgacatgccg
atcggtctcgtcgtctgggacgattattcgaggaagcgtggatcggacgcgatcgccaat
ggtgacggcggcgcgccgggggggcgcgagacggaatttgccgatctcttgcgcttcatc
cgcgacaatggggtcgacaacatcgtctggctgacggccgacgtgcattacaccgccgcc
catcactacgacccgtcgcgtgccgccttcaaggatttcctgcctttctgggagttcgtc
tccggccccttgcattccggcacctatgggccgaaggaactcgatatgaccttcggaccg
gaagtccgcttcatcaaggcgtcggccggcggcgcagacagcaatctgccgccgtcggcg
ggcctgcaattcttcggaatcgtcgatgtcaacggccagaccgagcaactgaccgtgcgg
ctcatggaccggcaggataaggagctgtggcgcgtgacgctcgatccggcggccgtcgct
tga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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