KEGG   Sinorhizobium fredii USDA 257: USDA257_c58340
Entry
USDA257_c58340    CDS       T02188                                 
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase GdhB
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd00220  Arginine biosynthesis
sfd00250  Alanine, aspartate and glutamate metabolism
sfd00430  Taurine and hypotaurine metabolism
sfd00910  Nitrogen metabolism
sfd01100  Metabolic pathways
sfd01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    USDA257_c58340 (gdhB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    USDA257_c58340 (gdhB)
   00220 Arginine biosynthesis
    USDA257_c58340 (gdhB)
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    USDA257_c58340 (gdhB)
Enzymes [BR:sfd01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     USDA257_c58340 (gdhB)
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_HM3 GDH_ACT2 GDH_HM1 GDH_ACT3 GDH_ACT1 ELFV_dehydrog
Other DBs
NCBI-ProteinID: AFL54345
UniProt: I3XEN9
Position
6070296..6075083
AA seq 1595 aa
MGVKHNPKRDRHIDAARAAVTKIGTETLPPEILFGGASNDDLDLYSPDMLALTAAHARRE
LARWDGGKPQVSVETVPGVAPGGTEVSIIAVTERNMPFLYDSVMGEVTSTHRDIHLAIHP
ILVVKPGQSTKLFDPDEESDPAHRVSHIQIHLSKLTPLEERSLSKRITDVLEQVHQAVHD
WPAMTALLDQAMRELEDYNASRKKSDRDEALAFLRWLRDNNFTFLGMREYTYSGKGEKAS
VERGKGRGLGILSNPDVRVLRQGKDAVLTTPEILAFLEGPDFLIVTKANVKSVVHRRAYM
DYIGVKRFDATGNVVGELRIVGLFTSTAYTRQAAEIPLLRHKIEKIVDHFGYDPQSHSGK
MLANTLEAYPRDDLFQIDVGVLAAFCEQINELADRPRVRVLPRIDHFDRFVSVIVFVPRE
QYDSDVREKIGDYLKTVYDGRVSAYYPAFPESGLARVHFIIGRPGGKTPRVPQAKLEEAV
RAIVTRWIDRFNLLARKDGIELAVGEAYQAAFTPAEAYADLSAIAACRADDPIRISFYHR
DRESPDALELKIFHADTPVSLSRRVPLLENLGFRVISEQTHDIGVRIHGQELREVVLHDM
ELIHRDGHTVHLAKTGAALEEAFLAAWNGTIEDDNFNRLVMLAGLTAREVTVLRAYSRYL
RQAGITYSQGYIADTLNKYPAIAADIVRLFSTRLDPKIDAKSRAKKTSALLAAIEEALSA
VPSLDEDRILRRYVNVIQSTLRTNYFQKDAEGRPRPVLAFKLDPKTLEGLPEPRPFREIF
VYGTEVEGVHLRFGKVARGGLRWSDRAQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFYPK
QLPLGGNRDEIFRAGTEAYKTYIRTLLSVTDNIVGQEVVPPQDTLRLDGDDPYFVVAADK
GTATFSDTANGLAQEAGFWLDDAFASGGSAGYDHKKMGITARGAWEAVKRHFREMDIDIQ
TTPFTVAGVGDMSGDVFGNGMLLSEKIRLIAAFDHRDIIIDPNPDIDLSFAERKRMFALP
RSSWQDYDRKTLSPGAMIISRAEKLVTLTPEAMAAIGIDKPKATPFEIMNAILKSQVDLL
WFGGIGTYVRGSNETDAEVGDRANDPIRVTAEELRARVIGEGANLGVTQRGRIGFSLAGG
RCNSDAIDNSAGVNSSDVEVNIKIALASAMRDGRLTRPKRNTLLAAMTDEVGHLVLRNNY
QQSLAISLTEMLGLGNRTPLARLMARLETDGHLNRKVETLPTEIAMAERYQGGKPLTRPE
IGVLLSYAKLVLFEELIQSELPDDPYFTATLERYFPAKMRKTYAGDIHGHRLRREIIATV
LANEAINRGGPAFVSTLTDATGFLSADVVKAAVLALDGFDLPRIYGEIDALDNRISGAVQ
NRLYQEVGRIFAVVAERALRTRASEGAVADAVARLRDGLQKLRGTMRAAISSESAEEARL
KSAGFIESGIPAKLAEEIAELSMMTLVPEIMQIATVTGEPLNRTAQGYFAVTETLRVNRL
LAAADRVPATEQFEAMALTRAVADIATARRDITVAALVEQKRDRNPVLAWQEQDRERVSR
AGDQLKLLTEKGETTLAKITVAAGLLSDLARGRAK
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgggcgtgaagcataatccgaaacgggatcgtcacattgatgcggcccgtgcggctgtg
accaagatcggaaccgagactctgccgccggagatcctcttcgggggagcaagcaacgac
gacctcgacctctattcgccggacatgctggcgctgaccgccgcccatgcccgccgggag
ctggcccgctgggatggcggcaagccgcaggtttcggtcgagacggtgccgggcgtagcg
ccgggaggaaccgaagtctcgatcatcgccgtcaccgaacgcaacatgccctttctttat
gactcggtcatgggggaggtgacgagcacccaccgcgacattcacctggcgatccatccc
attctggtcgtgaaacccggccaatccacgaaactgttcgatccggacgaggaaagcgac
ccggcgcaccgcgtcagccatatccagatccatctgagcaagctgacgccgctcgaggag
cggtcgctgagcaagcgtatcaccgatgtgctggagcaggtccaccaggccgtccacgac
tggccggcgatgaccgccttgctcgatcaggccatgcgcgaactggaggattacaacgct
tcgcgcaagaagagcgaccgcgacgaggcgctcgcctttcttcgctggctaagggacaac
aatttcaccttcctcggaatgcgcgaatacacctattccggcaagggcgagaaggcgagc
gtcgagcgcggcaagggccggggcctcggcatcctttccaatccagacgtccgcgttctg
cgtcagggcaaggatgcggtgttgacgacgcccgagatcctcgccttcctggaaggtccc
gactttctgatcgtcaccaaggccaatgtgaagtccgtcgtgcaccgccgggcctacatg
gattatatcggcgtcaagcgcttcgacgccaccggaaacgtcgtcggggaactccgtatc
gtcggcctcttcacctcgacggcctacacccggcaggcggcggaaatcccgctgttgcgg
cacaagatcgagaagatcgtcgatcacttcggctacgacccgcagagccactcgggcaag
atgctggcgaatacgctcgaagcctatccgcgcgacgatctcttccaaatcgacgtcggc
gtgctcgccgccttctgcgagcagatcaacgagctcgccgaccggccgcgcgttcgcgtg
ctgccgcgtatcgaccacttcgaccgcttcgtttcagtcatcgtcttcgtgccacgcgag
caatatgattcggacgttcgcgaaaagatcggcgattacctgaagaccgtctatgacggc
cgcgtctccgcctactatcccgccttcccggaaagcggtttggcccgcgtgcacttcatc
atcggacgcccgggcggcaagacaccacgcgtcccgcaggccaagctcgaggaagcggtc
cgcgctatcgtcacccgctggatcgaccgcttcaacctgcttgcccgcaaggacggcata
gagcttgcggtcggagaggcctatcaggccgccttcacgccggccgaggcctatgccgac
ctctccgccatagccgcctgtagggcggacgatccgattcgcatctccttctatcatcgg
gaccgggaaagcccggacgcgctggaactgaagatcttccacgccgacaccccggtgtcg
ctctcccgccgcgtgccgctcctcgaaaatctcggtttccgcgtcatcagcgagcagacc
cacgacatcggtgtgcgcatccatgggcaggaactgcgtgaagtagtgctgcacgacatg
gagcttattcaccgcgacggccacacggtccatctcgccaagaccggtgctgccctggag
gaagccttcctcgccgcctggaacggcacgatcgaggacgacaacttcaaccggctggtc
atgctggcggggctcaccgcccgcgaagtaactgtgctgcgcgcctattcacgctacctg
cgccaggccgggattacctattcgcagggctatatcgccgatacgctgaacaaatatccg
gccatcgccgccgatatcgtccgcctgttctcgacgcggctcgatccgaagattgacgcg
aagtcgcgcgcgaagaaaaccagcgccctgctcgcggcgatcgaggaggcgctatccgcc
gtaccaagcctcgacgaggaccggatcctgcgccgctacgtcaacgtcatccagtcgacg
ctccggaccaactatttccagaaggatgcggagggcagaccgcgtccggtgctcgccttc
aaactcgatccgaagacgctcgaaggcctgccggaaccgcggccgttccgcgaaatcttc
gtctacggcaccgaagtcgaaggcgtgcatctgcggttcggcaaggtggcgcgcggcggg
cttcgctggtccgaccgggcccaggattatcgcaccgaggtgctcggcctcgtcaaggcg
cagcaggtcaagaacgcggtcatcgtgccggtcggcgccaagggtggcttctatccgaag
cagcttcccctaggcggcaaccgcgacgagatcttcagggccggcaccgaggcctacaag
acctatatccgtacgctcctgtcggtgacggacaacatcgtcggccaggaagtcgtaccg
cctcaagacacgcttcgcctcgacggcgacgacccttatttcgtcgtggccgccgacaag
ggtaccgcaaccttctcggacacggcgaacgggctggcgcaggaggccggtttctggctc
gacgacgccttcgcctccggcggctcggccggctacgaccacaagaagatgggcatcacg
gcgcgcggcgcctgggaggcggtcaagcggcatttccgcgagatggacatcgacatccag
acgacgcccttcaccgtcgccggcgtcggcgacatgtcgggcgacgtcttcggcaacggc
atgctgctttcggagaagatccggctgatcgccgccttcgaccaccgcgacattatcatc
gacccgaatccggatatcgatctctccttcgccgaacgtaagcgcatgttcgcgctgccg
cgctcgagctggcaggactatgaccgcaagacgctttcgcccggtgcgatgatcatctcg
cgcgcggaaaagctggtgacgctgacgcccgaggcgatggcggcgatcggcatcgacaag
ccgaaggcgacgccgttcgagatcatgaacgccatcctgaagagccaggtcgaccttctg
tggttcggcggcatcggcacctatgtccgcggcagcaacgagacggatgccgaagtcggc
gatcgtgccaacgacccgatccgcgtcacggcggaagagctgcgcgcccgggtgatcggc
gagggcgccaatctcggcgtcacccagaggggtcgcatcggcttctcgcttgccggcggg
cgctgcaattccgatgcgatcgacaattcggccggcgtcaattcctccgacgtggaggtc
aacatcaagatcgccctcgcctcggcgatgcgcgacggacgtctgacccgacccaagcgc
aacacgcttctggcggctatgacggacgaagtcggccatctcgtgctgcgcaacaactat
cagcaatcgctggcaatctcgctcacggaaatgctgggcctcggcaaccgcacgccgctg
gcacggctgatggcgcggctcgagaccgacgggcatctcaaccgcaaggtggagacgctg
ccgacggaaatagccatggccgagcgctaccaggggggcaaaccgctgacgcgcccggag
attggcgtgctgctctcctatgcgaagctggtattgttcgaggaactgatccagagcgaa
ctgccggatgacccctatttcaccgcgacgctcgaacgctactttccggcaaagatgcgc
aagacctatgccggggatattcacggccatcgcctgcgccgcgaaatcattgcgacggtg
ctcgccaacgaagccatcaaccgcggcggccccgccttcgtctcgacactcacggacgcg
accggcttcctttccgccgatgtcgtaaaggcagcggtgctggcgctggatggtttcgac
ctgccgcggatctatggcgagatcgatgcgctcgacaacaggatcagcggcgcggtccag
aaccggctctaccaggaagtcgggcgtatctttgcggtcgtcgccgagagggccttgcgg
acgcgggcgtccgagggggccgttgccgacgccgttgcgcggctgcgcgatgggctgcag
aagctgcgcggcacgatgcgcgcggcgatttcgagcgagagtgccgaggaggcgcgcctg
aagtctgccggattcatcgaaagcggcatcccggcaaagcttgccgaagagatcgccgaa
ctgtcgatgatgaccctggtccccgagatcatgcagatcgccacggtaaccggcgagcct
ctcaatcgcacggcgcaaggctatttcgccgtgaccgaaacgctccgggtcaaccgcctg
ctggcagccgccgatcgcgtgcccgccaccgaacagttcgaggcgatggcgctgacacgg
gccgttgccgacatagccaccgcccgccgcgatatcaccgtcgccgcgctcgtcgaacag
aagcgagaccgcaatccggtactcgcctggcaggaacaggaccgtgagcgcgtatcgcgc
gctggcgaccagttgaagctcctgaccgaaaagggcgagacgacgcttgccaagatcacc
gtcgccgcaggtctcctcagcgatcttgcgcgcggcagggcgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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