KEGG   Serratia fonticola GS2: AV650_01655
Entry
AV650_01655       CDS       T04716                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sfg  Serratia fonticola GS2
Pathway
sfg00300  Lysine biosynthesis
sfg00470  D-Amino acid metabolism
sfg01100  Metabolic pathways
sfg01110  Biosynthesis of secondary metabolites
sfg01120  Microbial metabolism in diverse environments
sfg01230  Biosynthesis of amino acids
Module
sfg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sfg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AV650_01655 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AV650_01655 (dapF)
Enzymes [BR:sfg01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     AV650_01655 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ALX97121
Position
complement(352319..353143)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMILSVTDDDLVCVNMGE
PNFDPQIVPFRATKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHDRFPERANIGFMQVVNREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLAEEVHV
ELPGGSLHIRWKGPGEPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtttaggcaacgactttatggtggtcgatgccgttaca
cagaacgtctatttttcacctgagctgatccgccgtctggccgaccggcatttgggcgtg
ggttttgaccagatgctggtggtagaaccgccgtacgatcccgaactcgatttccattac
cgtattttcaatgctgacggtagcgaagtggcccagtgtggcaacggcgcccgctgtttt
gcccgctttgtgcgcttgaaaggcttgaccaacaaacgtgatatccgcgtcagcacccag
accgggcgcatgatccttagcgttaccgatgatgacctggtgtgcgtcaatatgggtgaa
ccgaatttcgatccgcagattgtgccgtttcgcgccaccaaagcggaaaagacctacatt
atgcgcgcggcggaacatacggtgctgtgcggcgtagtctcaatgggtaacccacactgt
gtgttgcaggtggacgacgtgaaaacggccaaggtggagctgttgggaccggtgctggaa
ggacacgatcgcttcccggaacgtgccaacatcggctttatgcaggtggtgaaccgtgag
cacatcaaactgcgggtttatgagcgtggtgccggtgaaacgcaggcctgtggcagtggt
gcctgtgctgccgtggcggtgggcattcaacaagagctactggcggaagaggtgcatgtc
gaactgcctggcggtagcctgcatattcgctggaaggggccaggggagccgttattcatg
accggcccggccacccatgtttatgacggatttattcacttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system