KEGG   Shigella flexneri 301 (serotype 2a): SF1152
Entry
SF1152            CDS       T00097                                 
Symbol
ycfB
Name
(RefSeq) hypothetical protein
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Pathway
sfl04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:sfl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    SF1152 (ycfB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfl03016]
    SF1152 (ycfB)
Enzymes [BR:sfl01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     SF1152 (ycfB)
Transfer RNA biogenesis [BR:sfl03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    SF1152 (ycfB)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC Asn_synthase ATP_bind_3
Other DBs
NCBI-GeneID: 1024072
NCBI-ProteinID: NP_707062
UniProt: Q83LF7
Position
complement(1193851..1195002)
AA seq 383 aa
MIEYAALKFNVVSDPMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG
EEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKE
IKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQ
SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD
GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV
GLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIKVIFDEPVAAVTPGQS
AVFYNGEVCLGGGIIEQRLPLPV
NT seq 1152 nt   +upstreamnt  +downstreamnt
gtgatagaatacgccgccttgaagttcaatgtcgtgagtgatccaatgtctgaaaccgca
aaaaaagtaatcgtcggcatgtccggcggtgtcgattcctccgtttctgcctggctgttg
caacaacagggatatcaggtcgaaggcctgtttatgaagaactgggaagaagacgacggt
gaggaatattgcacagcagcagcggatctggctgatgcccaggcggtctgcgacaagctc
ggcattgaactgcacaccgttaactttgctgccgagtactgggacaacgtcttcgaactg
ttccttgccgaatataaagccggtcgcacgccgaatccggatattctgtgcaacaaggag
atcaaatttaaagccttcctcgaatttgccgccgaagatttaggtgccgattatatcgct
accggtcattacgtacgtcgggccgatgtcgatggcaagagccgcctgctgcgtggtctg
gacagcaataaagaccagagctacttcctttatacgctcagccatgagcagattgcgcaa
agcctgttcccggtaggcgaactggaaaaaccgcaggtgcgtaagattgctgaagatctt
ggtctggtcaccgcgaagaaaaaagactctaccggcatttgcttcattggcgaacgtaaa
ttccgcgagttcctgggccgttatctcccggcgcaaccgggcaaaatcattaccgtcgat
ggcgatgaaattggtgagcaccaggggctgatgtatcacactctcggtcagcgtaaaggt
ctgggtatcggtggcaccaaagaaggtaccgaagaaccgtggtatgtggtggacaaagac
gtcgaaaacaacattctggttgtcgctcagggccatgaacacccgcggctgatgtctgtc
gggttgattgcccagcagctgcactgggtcgatcgcgaaccattcaccggcactatgcgt
tgcacggtaaaaacccgctatcgccagaccgacattccgtgcaccgtcaaggcgctggac
gacgatcgcattaaagtgattttcgatgagccggttgccgccgtgacgccgggccagtct
gccgtcttctataacggtgaagtgtgcctcggtggcggtattattgagcagcgtctgccg
ctgccggtctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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