KEGG   Shigella flexneri 301 (serotype 2a): SF4230Help
Entry
SF4230            CDS       T00097                                 

Gene name
holC
Definition
(RefSeq) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Pathway
sfl00230  Purine metabolism
sfl00240  Pyrimidine metabolism
sfl01100  Metabolic pathways
sfl03030  DNA replication
sfl03430  Mismatch repair
sfl03440  Homologous recombination
Module
sfl_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:sfl00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    SF4230 (holC)
   00240 Pyrimidine metabolism
    SF4230 (holC)
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    SF4230 (holC)
   03430 Mismatch repair
    SF4230 (holC)
   03440 Homologous recombination
    SF4230 (holC)
Enzymes [BR:sfl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SF4230 (holC)
DNA replication proteins [BR:sfl03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SF4230 (holC)
DNA repair and recombination proteins [BR:sfl03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch exicision repair)
    DNA polymerase III holoenzyme
     SF4230 (holC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID: 1027003
NCBI-ProteinID: NP_709942
UniProt: A0A0H2W173
Position
4403290..4403733
Genome map
AA seq 147 aa AA seqDB search
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGSAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq 444 nt NT seq  +upstreamnt  +downstreamnt
atgaaaaacgcaacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcaactggtgtgtgaaattgccgcagaacgttggcgcagcggtaagcgcgtactc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcagtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa

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