KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01062
Entry
SPHFLASMR4Y_01062 CDS       T04949                                 
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
sfla  Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfla03400]
    SPHFLASMR4Y_01062 (addA)
Enzymes [BR:sfla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SPHFLASMR4Y_01062 (addA)
DNA repair and recombination proteins [BR:sfla03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     SPHFLASMR4Y_01062 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DUF2800 DEAD AAA_12
Other DBs
NCBI-ProteinID: ASK87831
UniProt: A0A220W4U8
Position
complement(1104280..1107732)
AA seq 1150 aa
MSSGKPKIFPLKDRQIDAVEPDAHIWLSASAGTGKTQVLTARVFRLLLTETVDPEHILCL
TFTKAGAAEMAERINRQLAAWVRMDDTLLENDLRAIGASTGPETRARARTLFARVLDAQG
GGLRIMTIHGFCQSLLASFPEEAGIASMFKPIEDRDQKILAREALGDLLLEEERAGRLQI
VEAIQRLSVRMGEEATEQFLMSCAAKADAMDGLPTGVLPFVRGVLGLPIDGDAQSWLAER
CADEAIDLRAITLLRDAMAEAGGKKEQERQLAIRLWLTLNPQERAAALSDIHLAWATKTT
GAPPKPTKGLLKVLPDYDFIAGSLFEWSNGLLEKAVLFEYADLFAGALEAGRAFYHRYAD
AKRLHGVVDFDDMIRMTARLLQKSDMAAWIRYKLDQRTDHILIDEAQDTNVAQWDIVRAL
AGEFFAGMGADPERHRTLFTVGDFKQAIFGFQGTSPHNYANARTEFFALADASEQRFGDL
SLDRSFRSTPPILEAVDATLEQISHEQLGLIEPIPEHRSNYQGASGSVTLWKPIANRSDA
DDEDEESWASEEKRVFAQKLALQIKKWLSPDNPLWLDRENRALQPKDILILVSKRDELSA
LIVARLFAEQVPVAGIDRIRLNQPLVVQDLLAAIRFVLQPHDDLNLASLLVSPLLGWSQE
DLLARGYRGKKDEEKSLWEFLRRQDRLGDHIKPLQQLLAMADFNTPYQFLETILSGAMQG
RCKLLARLSHAAVDPLDELLATALAFEQDHIPTLQGFLDWFDRGDVEIKREQVEGGNEVR
LMTVHGAKGLQAPLVILANATFDPASKKSGGFNIKLGEGTGLELEYPVVPVRKSERVGIL
AEHSAYADKVAMEEHWRLLYVAMTRAEEHLVVAGVLGPRAKGEVPELSWYGAIERGLIAL
GCDWQDNPEWLASREYRVESRNKPAVLPAIAPSADQESERTPAPDWLFRSAPEESRPPRP
LTPSHLGPDDASNPPPDMAMRDAAERGILLHSLFQRLPNIAPERRLDVADRWLEKQKQIG
DPARRAEIIKTVLAVMDNPVWSALFDPESLAEAPIAAVVGEHVISGTVDRLLITDDHIYV
VDFKTGRRVPDNAGQAPVAYLRQMAAYVVALEKIFPDRPIKAGLLYSHGPLMLEISPDLI
DRHKPGFESI
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgagtagcggcaagccgaaaatcttcccgctcaaggaccggcagattgatgcggtcgag
cccgatgctcatatctggctgagcgcgtccgccggcaccggtaagacgcaggtcctgacc
gcgagagtgttccgtctgttgctcacagagacggtcgatcccgaacatattctctgcctg
acctttaccaaggctggcgctgcggaaatggcagagcggatcaaccggcaactggccgcc
tgggtgcggatggacgatacgctgctggaaaatgatcttcgtgcaatcggcgcctcgacc
ggacccgaaaccagagcgcgcgcgcggactttatttgcccgcgtgctcgacgcccagggc
ggcggtctgaggatcatgacgattcatggtttctgccagtcgctgcttgcatcctttccc
gaagaggcgggcatcgcctcgatgttcaagccgatcgaggaccgcgaccagaagatattg
gcgcgcgaggctttgggtgatctgctgctcgaggaagaacgggccgggcgtctacagatt
gtcgaggcgatccagcggctcagcgtccggatgggcgaggaggcgaccgaacaatttttg
atgagctgcgcggccaaggctgatgcgatggatggactgcccaccggcgtcctgcctttt
gtccgcggggtgctcggcctgccgattgatggcgatgcgcagtcttggctggcggaacgc
tgcgcggacgaagcgattgacctgcgcgcgatcactctgttgcgtgatgccatggcggaa
gccggaggcaagaaggaacaggagcggcaattggcgatccgtctctggttgaccctcaac
ccgcaggaaagggccgcagcattatcggatattcatctggcctgggcgaccaaaaccacg
ggcgcgccgccgaaaccgaccaaaggcttgttaaaggttctgccggactatgattttatt
gccggttcgctgttcgaatggagcaacggcctgctcgaaaaagcggtgctgttcgaatat
gccgacctgttcgcgggcgcgctggaagcggggcgcgccttctaccaccgctatgccgac
gccaaaaggctgcacggcgtggtcgatttcgacgatatgatccggatgaccgcgaggctc
ttgcagaaaagcgatatggcggcctggatccgctacaagctagaccagcgcaccgatcat
atattgatcgacgaggcgcaggataccaatgtcgcgcaatgggatatcgtccgggcgctg
gccggcgagttttttgccggcatgggcgccgatccggaacgccaccggacgctgttcacg
gtcggcgatttcaagcaggcgatctttggctttcagggcaccagcccgcataattatgcc
aatgcgaggaccgaattttttgccttggccgacgcgtcggaacaaaggttcggcgacctg
tcgctggaccggagtttccgctcaaccccgcccattctggaagcggtcgatgccacgctg
gaacagatcagtcacgaacaactggggctgatcgaaccgatacccgagcatcgcagcaat
tatcagggcgcgagcggcagtgtgaccttgtggaagccgatagcgaacagaagcgacgct
gacgatgaagatgaggaatcctgggccagcgaggagaaacgggttttcgcccagaagctt
gcactgcagatcaagaaatggctgtcaccggacaatccgctatggctggaccgggaaaac
cgggctctgcagccgaaagacatattgatattggtgagcaagcgtgacgaactgagcgcg
ctgattgtggctcgcctgttcgccgagcaagtcccggtggccgggatcgaccggatccgt
ctcaaccagccgctggtggtgcaggacttgctggccgctatccgtttcgtgctgcagccc
catgatgatctcaatctcgccagcctgctggtttcgccgctgcttggctggagccaggag
gatttgctggctcgcggttatcgcggcaagaaggatgaagagaaaagcctctgggagttc
ttgcgcaggcaggaccgtcttggcgaccatatcaagccgctgcagcagctgctggcgatg
gccgatttcaatacgccctatcagtttctcgagacgatcctgtccggggcgatgcagggg
cggtgcaaattgctggcccggctcagccatgcggcggtcgacccgctcgacgagctgctg
gcaacggcgctggcctttgagcaggaccatatacccaccttgcagggttttcttgactgg
ttcgaccggggcgatgtcgaaatcaagcgcgaacaggtcgagggcggcaatgaagtgcgc
ctgatgaccgttcacggcgcaaaaggattgcaggcaccgctggtgatcctcgccaatgcg
acctttgaccctgcgagcaagaaaagcggcggcttcaatatcaaactcggcgaggggacc
ggtctggaactcgaatatccggtggtcccggttcgcaagtcggagcgcgtcggaatcttg
gctgaacattccgcctatgccgacaaggtcgcaatggaagaacattggcggctgctttat
gtcgcgatgacccgggcggaagagcatctcgttgtagccggtgtgctcggaccaagagca
aagggcgaagtgcccgagctaagctggtatggtgccatcgagcgcggcctgatcgctctc
ggctgcgactggcaggataacccggaatggttggcgtcgcgggaatatcgcgtcgagagc
cggaacaagcccgccgtcttgcctgcgattgccccaagcgctgatcaggaatcggagaga
acgcctgcaccggactggttattccgctcggcaccggaggaatcgcgaccaccgaggccc
ctgacaccctcgcatctcggccccgacgatgccagcaatccgccgcccgatatggccatg
cgcgacgctgccgaacgtggcatattgctgcacagtctgttccagcgtctgcccaatatc
gcaccggaacgccgactggatgtcgccgaccgctggctggaaaagcagaagcagattggc
gatccggcccggcgcgcagagattatcaagacggttctcgcggtcatggacaatccggtc
tggtccgctctttttgaccccgaaagcctggcagaagcgccgattgcagcggttgtcggc
gaacatgtcatttccggtacggtcgaccgattgctgatcaccgacgatcatatctatgtc
gtcgatttcaaaacgggccgccgggtgcctgataatgccggacaggcaccggtcgcctac
ctgcggcagatggcggcctatgttgtcgcgctggaaaagatattcccggaccgtccgatc
aaggccggactgctctattcgcacggtccgctaatgctggagatttcgcccgatctgatc
gaccggcacaagccgggctttgagtcgatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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