KEGG   Scleropages formosus (Asian bonytongue): 108928597
Entry
108928597         CDS       T04919                                 
Name
(RefSeq) collagen alpha-2(V) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108928597
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sfm00536]
    108928597
Glycosaminoglycan binding proteins [BR:sfm00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108928597
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 108928597
NCBI-ProteinID: XP_018598107
Position
12:complement(29017386..29047290)
AA seq 1500 aa
MVSGVPSGTLVLVAAVVALGGLTGGQDTEYLDELSCKYKGQVYANKDVWKPEPCWTCACD
AGAVICDEIACVEVTGCERVTIPPGECCPVCEGASEDHSANGRNGGRVYKGQKGEPGEVP
LVTGIRGRPGPMGPPGSPGSRGERGSKGRPGPRGPPGYDGEPGVPGQPGEPGPAGHPTHP
GGQLASHMAGGFDEKSGKAGPVGMVSGMRGEAGARGPPGPSGPSGPHGMQGPPGEVGEPG
PMGSSGPRGPEGPPGKPGEDGEPGKAGNSGEPGFPGSPGARGFPGMPGLPGLKGHRGHQG
PAGLKGESGAVGSKGEAGPTGQMGAPGPQGPRGMPGERGRIGPSGAPGMRGPPGNVGKPG
PMGPLGLSGAPGFPGSPGMKGEAGPTGVRGPEGPQGQRGDTGQQGRPGPTGLQGAAGTDG
GPGTKGPAGVPGPQGPVGLLGPPGPPGPQGSTGQPGIKGQAGDVGVPGFKGEAGPKGELG
PPGPQGTIGPQGEEGKRGHRGDPGSVGPPGPPGERGAPGNRGFTGADGLPGPKGAQGDRG
TPGSAGPKGTNGDPGRTGEPGLPGARGLTGAPGVQGAEGKLGPLGPPGEDGRPGPAGSTG
TRGPPGPMGLPGPKGFSGDPGKTGEQGTPGSPGQRGPPGKDGEVGPAGPPGPAGVAGERG
EQGPPGVNGFQGLPGPPGPPGEAGKPGDQGIPGEGGPVGPVGPRGERGTPGERGELGPPG
LQGSKGIPGAPGSDGPKGSPGPTGAVGDVGPPGLQGMPGERGISGPSGPKGDRGSPGEKG
SEGTPGSDGARGLPGPLGPPGPSGPRGEKGEPGPRGPSGPQGSRGSPGSRGEPGPTGAVG
FAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGAHGPTGPFGVAGLKGGRGTQGAPG
PTGFPGSPGRVGPPGSAGPVGQPGPIGPPGKEGPPGIRGDNGPPGRQGERGPPGPAGSPG
DKGDPGEDGPPGPDGPPGPAGTTGQRGIVGLPGQRGERGMVGLPGPAGPPGKQGATGATG
DKGPTGPVGAPGATGPRGDSGPDGPAGSDGPPGKDGVPGARGDRGDPGPEGLAGAQGAPG
SLGPVGAPGGPGKRGETGSRGPVGPPGSAGKRGLVGPQGPRGDKGELGEHGERGQKGHRG
FTGLQGLPGPPGTPGEQGAPGIVGPSGPRGPPGPVGPPGKEGYVGQPGPMGPPGTRGLSG
DIGPEGPPGEPGPPGPPGSPGPPTAAMEDLFGSPQDYDAGPPPPPEFSEDEALPNNNSSD
LLQADPEVQATLKALSGQIDSMRSPDGSKQHPARTCEDLRQCYPLKKSGEYWIDPNQGSP
EDAIKVHCNMDTGETCISANPSSIPRKTWWTSSSAEQKHVWFGADMNGGVRFTYGNKDQA
PSSVTVQMTFIRLLSKEASQTITYHCKNTVGYKNEKTGNLKKALIFKAANDLELKAEGNN
RFRYTVIEDRCSEANGNWGKTIFEYRTQKTARLPIVDMAAIDVGGADQEFGIDIGPVCFA
NT seq 4503 nt   +upstreamnt  +downstreamnt
atggtgagcggcgtgccgtccgggacccttgtgctcgtcgctgcggtcgtggccctcggc
ggcctcacggggggccaggacaccgagtacctggacgagctgagctgcaagtacaaaggg
caggtctacgccaacaaggacgtctggaagccggagccgtgctggacgtgcgcgtgcgac
gccggcgccgtgatctgtgacgaaattgcgtgcgtggaggtgacgggctgcgagagggtg
accatcccccccggagagtgctgccccgtgtgcgagggtgcgagcgaggaccacagcgcc
aacgggcggaatgggggccgagtctacaagggtcagaaaggtgaacctggagaggtgccg
ctggtgacgggcatcaggggtcgccccggaccgatggggcctcctggttccccgggatcc
agaggagaacgtggcagtaaaggacgaccgggtcctagaggtcccccgggctacgacgga
gagcccggagtgccaggacagccaggagagccgggccctgccgggcaccccacacaccca
gggggtcagctggcctctcacatggctggaggcttcgacgagaagtctgggaaggccgga
ccggtcggcatggtatccggaatgaggggtgaagctggagcaagaggacctcctggaccc
tccggtccatctgggccccatggaatgcagggacctcctggagaagtaggagagccaggc
cccatgggctccagtggtccacgggggccggaggggccacctgggaagccgggtgaagat
ggagaaccaggaaaagctggaaactccggagagcccggattccccggatccccgggagca
agaggctttccaggaatgcctggtctgccaggattgaaaggtcacagaggacaccaagga
ccagcaggtttaaaaggggaatcaggtgctgttggatcaaagggtgaagcaggacccacg
ggtcagatgggagctccaggtcctcagggtccaagagggatgccaggcgagcgaggacgc
attgggccttccggagcaccggggatgcgtggaccaccaggaaatgtgggcaaaccaggt
ccgatgggtcctctgggtctcagcggcgcaccgggattcccaggaagcccaggtatgaag
ggtgaagcaggtcccactggagtgcggggccccgaaggcccccaggggcagagaggtgac
acagggcaacagggcagacccggtcccactggcctgcagggagcagctgggacagacgga
ggacccggaaccaagggtccagcaggagtgccaggtcctcaggggcctgtcggtctactt
ggaccccctggtcctccaggccctcagggaagcacagggcaaccaggaatcaaaggtcaa
gcgggagacgtcggggtcccaggtttcaaaggagaagctggacccaaaggagaactggga
cccccgggccctcaagggaccattggaccccaaggcgaggaagggaagagaggccatcgt
ggtgatcctgggtctgtgggccctccaggtccccctggtgagaggggcgctccaggcaac
aggggcttcactggtgcagatggccttcctggacccaagggtgcacaaggagaccgagga
acacctggatcagctggcccaaagggcactaacggagatcctgggcgcacgggtgaacca
ggccttcctggtgccaggggactgacgggagccccaggagtccaaggtgctgaaggcaag
ctgggaccactgggtccaccaggagaagatgggcgaccaggccctgcaggatccactggg
accagaggaccacctggaccaatgggtttgccaggaccgaagggattcagtggagaccct
gggaagactggtgaacagggaactccgggctctccagggcaaaggggtccaccaggaaaa
gatggtgaagtcggtccagctggtcctcctggccctgcgggtgttgccggtgaaagagga
gaacaggggccaccaggggtaaatggcttccagggtttgcctggacccccaggcccacct
ggagaagcaggaaagccaggtgatcagggaattcctggggaaggtggacctgtcggtcca
gttggcccgaggggagagcgtggcactccaggtgagagaggagaacttggtcctccagga
ctccaaggatccaaaggcatcccaggagcccctgggtcagatgggccaaagggaagtcca
ggtccaactggtgcagtgggtgacgtcggtcctcctggtcttcagggaatgcctggagaa
cgtggtatctcaggaccctctgggcctaagggagacaggggatcacctggtgagaaagga
tcagagggaactccaggaagcgatggtgcacggggacttcctggtccacttgggcccccc
ggaccaagcggacccagaggggagaagggtgaacctggaccacgtggtccatctggaccc
caaggatccagaggaagtcctggatctcgtggagaaccgggtcccactggtgctgtggga
tttgctgggccacctggccctgatggtcaaccgggggtcaaaggtgaaccaggagaacca
ggccagaagggcgatgctggatctccaggccctcaaggcttagctggtgctcatgggcct
actggtccatttggggttgctggactgaagggcggtagaggaacccagggagctccaggt
ccaactggtttccctgggtctccagggagagtaggcccaccaggttctgctggtccagtc
ggacaaccaggacccattggacctcctgggaaggaaggtcctccgggtattcgtggtgac
aatggacctcctggtcgtcagggagagcgaggtcccccaggccccgcaggcagcccagga
gacaaaggagatccgggagaagatgggccaccgggacctgatggcccaccaggtccagct
ggaaccacaggacagagaggcatcgtaggtcttcctggtcagaggggagagcgtggaatg
gttggacttccaggtccagcaggtcctccaggaaagcaaggtgccacaggagccactggt
gataagggccctacgggacctgttggagcgcctggtgcaactggacctcgaggagactct
ggtccagatggacctgctggctctgacggaccaccgggaaaagatggagtaccaggcgcc
aggggagaccgtggggacccaggccctgagggtctggctggtgcccagggggccccaggt
tctctaggtccagttggagcaccaggtggcccagggaaaagaggagagacaggatcaaga
ggaccagtaggacctcctggctcagcaggaaagcgaggattagtaggaccccaggggcca
agaggagacaagggagagcttggagagcatggggagaggggacagaaaggtcacagaggt
ttcaccggtctgcaaggcttacctggaccaccgggcaccccaggtgagcagggagctcca
gggatcgttggacccagcggcccaagaggacctcctggccctgttggacccccaggaaaa
gagggttatgttggacagccaggcccaatgggaccacctggaacccgtggcctcagtggt
gacattggaccagagggacctcctggagaaccagggcccccagggcctcctgggtcccct
ggccccccaacagcagcaatggaggacctgtttggcagtccccaggattatgacgcaggt
cccccgcctcctcctgagttcagcgaagacgaagctcttcccaacaacaactcgtcagat
ctcctccaggcagaccccgaggtacaggccactctgaaagccctgagcgggcagatcgac
agcatgcgcagccctgacggcagcaagcagcacccggccagaacctgtgaagacctgagg
cagtgctacccactgaaaaagagtggggagtactggattgatcccaaccaggggtccccg
gaggacgccatcaaagtgcactgtaacatggacacaggggagacgtgcatttcggcaaac
ccatcgagcattccccggaagacatggtggacttccagctccgcagaacaaaaacacgtc
tggttcggagccgacatgaacggtggagtccgcttcacttatggaaacaaagaccaggcg
cccagttctgtgaccgttcaaatgacgttcatccgcctgctgtccaaagaggcctctcag
accatcacttaccactgtaagaacacagtgggctacaagaacgaaaaaaccggaaacctg
aagaaagccctcatcttcaaggctgccaatgacctggagctgaaggcagagggaaacaac
cgcttccgatacactgtcatcgaggacagatgctctgaggcaaacggtaactgggggaag
accatctttgagtacaggactcagaaaacggcaagactgccgatcgtggacatggccgcc
attgacgtcggtggcgcggaccaagagttcggcattgacattgggccggtttgctttgcg
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (92)   
   KEGG ORTHOLOGY (1)   
   RefGene (88)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (101)   

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