KEGG   Scleropages formosus (Asian bonytongue): 108930986
Entry
108930986         CDS       T04919                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03420  Nucleotide excision repair
sfm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108930986
  09124 Replication and repair
   03420 Nucleotide excision repair
    108930986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfm04121]
    108930986
   03400 DNA repair and recombination proteins [BR:sfm03400]
    108930986
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfm04147]
    108930986
Ubiquitin system [BR:sfm04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     108930986
DNA repair and recombination proteins [BR:sfm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108930986
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108930986
Exosome [BR:sfm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108930986
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW GP41
Other DBs
NCBI-GeneID: 108930986
NCBI-ProteinID: XP_018602040
Position
14:19498839..19507150
AA seq 864 aa
MFPTGLSSPNPPTAAQDVRPAASDGSNGSSSSNSAPKKRRINSSDKEDFDSHPLSPPRII
TTSSSSSTTSAGSSAPLYYSQKKLRFEDSLDFIGLDVKMAEESSSSSSSSSSNRAKLFLP
SGYHANGLTKAVGSAAFNSGKPGAAKKLVIRNFKEKPKLPENYSDETWQKLKEAVEAIQN
STSIKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIHQFREEALDSVLFLKKI
DKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDQKVQNKTIDG
ILLLIERERSGEAIDRSLLRSLLTMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQERE
VPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENR
IQDLSLLYQLFSRVRGGVQALLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHI
IDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDK
IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMF
KDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFK
TFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQ
ATGIEDSELRRTLQSLACGKARVLSKIPKSKDVEDGDKFTCNDDFKHKLFRIKINQIQMK
ETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKR
IESLIDRDYMERDKENPNQYNYVA
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccgacggcagcccaggacgttagaccc
gccgcttctgatggtagtaacggcagcagcagcagcaactcggcgcccaagaagaggaga
ataaacagctcggacaaggaagacttcgactcgcacccgttatcccctcccagaatcatc
actactagttcctcgtcctccaccacctccgccggctcatccgctccactctactacagc
cagaagaagctgcggttcgaggactcgctggatttcatcggcctggatgtgaagatggcc
gaggagtcgtcctcttcctcgtcgtcctcctcctcgaacagggccaaactcttcctgccc
tccggataccacgcgaacggattgaccaaagcggtcggctcggctgccttcaacagcggc
aaaccgggagccgccaagaaactagttatcaggaattttaaagaaaagcctaagttgcca
gagaactactctgatgaaacttggcaaaagctgaaggaggcagttgaggctattcagaac
agcacttcaatcaagtataatcttgaggagctgtatcaggctgttgagaatctctgctct
cataagatatctgcaaaactttataaacaactaagggtggtgtgtgaagaccacattaag
gcccagattcatcaattcagagaggaagcactggacagcgtgcttttcttgaagaaaata
gacaagtgctggcaggatcattgcagacaaatgatcatgattagaagcatcttcttattt
ttggatcgaacatatgttttacaaaactcaatgctgccctccatctgggacatgggtttg
gagttgttccggttctacatcattagcgatcagaaagtccagaacaagaccattgatggc
atcttgctgctaattgagagggagcgcagtggtgaggccattgaccgcagtcttctacgc
agcctcctgaccatgctgtctgatctgcagatctatcaggactcatttgagcagagattt
ttggaggagaccaaccgactgtatgctgcagagggccagagactgatgcaggagagagag
gttccagaatatctccatcatgtaaacaaacgtttggaggaagaggcagacagagtcatt
acatatttagaccagagtacacaaaaacccctcattgcaactgtcgaaaaacaactgctg
ggtgaacacttgacagcgactctacagaaaggccttaaccacctcctggatgagaaccga
atccaggatctgtccctcctatatcagctctttagtcgagtacgggggggcgtgcaggct
ctgctgcagcactggatagagtacatcaaggcctttggcagcacaattgtcattaaccct
gagaaggataaaactatggtgcaagagctgctggacttcaaagacaaggttgaccacatc
atcgacgtgtgcttcctgaagaatgagaagtttgtcaatgccatgaaggaggcttttgaa
accttcatcaacaaaaggccaaacaagcctgctgaactcattgccaaatatgttgattca
aagttgagggcagggaacaaagaggctacagatgaagagcttgaaaagatgctggataaa
atcatgatcatttttcgattcatatacggaaaagatgtttttgaggccttttacaagaag
gaccttgctaagaggctgttggttggaaaaagtgcttctgtagatgccgagaagtccatg
ttatctaaactgaagcatgagtgtggtgcagccttcaccagtaagctagaaggaatgttc
aaggacatggagctctccaaggacatcatggtgcagttcaaacagtatatgcagtgtcag
aacatccctggcaacattgagctgactgtgaacattctcaccatggggtactggccaacc
tatgtgcctatggaagtgcatttacccccagagatggtaaaactgcaagagatatttaaa
acgttttatcttggcaaacacagtggacgaaagcttcagtggcagtcaacgcttggacat
tgtgtcttgaaagctgaatttaaggaggggaaaaaagagcttcaagtgtcactgtttcag
acactagtgcttctcatgtttaatgaaggagaggaatttagcttggaggagatcaagcag
gcaacagggatagaggacagcgagctgcgacggacactgcagtccttggcttgtgggaag
gcgcgggtcctctctaaaatcccaaagagtaaggatgtagaagatggcgacaagttcacc
tgcaatgatgatttcaagcacaaactcttcaggataaagatcaaccaaatccagatgaag
gaaacggttgaggagcaagccagcaccacagaaagagtcttccaagatcggcaataccag
atagacgcagccattgttaggatcatgaaaatgaggaagaccctgagccacaatttactc
atgtcggaagtgtacaaccagttgaagtttcccgtcaagcctgcagacttgaagaaaaga
atagaatcactcatcgacagggactatatggagcgtgacaaggagaatccaaatcagtac
aactatgtggcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system