KEGG   Scleropages formosus (Asian bonytongue): 108934744
Entry
108934744         CDS       T04919                                 
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03022  Basal transcription factors
sfm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108934744 (gtf2h3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108934744 (gtf2h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfm03021]
    108934744 (gtf2h3)
   03400 DNA repair and recombination proteins [BR:sfm03400]
    108934744 (gtf2h3)
Transcription machinery [BR:sfm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     108934744 (gtf2h3)
DNA repair and recombination proteins [BR:sfm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     108934744 (gtf2h3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 108934744
NCBI-ProteinID: XP_018608323
Position
1:complement(10858632..10862157)
AA seq 305 aa
MASEDEVSLLVVVVDVNPIWWGQQAQREPEFTLSKCLDSVMVMGNSHLVMNRTNKLAIIA
SHCQESHFLYPSKHWKAGDAAGDDAVSSSRDGKYEVLAVTNDQISEEVRNLMARTEVKGH
QTDTLLAGSLAKALCYIHRVSKELEAGQEMKSRILFFEQVIKAAEDCALQYMNFMNVIFA
AQKNSIVIDACVLATDSGLLQQACDITGGLYLKIPQKSALAQYLLWVFLPDANQRSQLVL
PPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIPLPQMVKPKKKK
LKPAT
NT seq 918 nt   +upstreamnt  +downstreamnt
atggcttcggaagatgaagttagccttctagttgtggttgtggacgttaaccccatatgg
tggggtcagcaagctcagcgggagcccgagtttaccttgtcaaagtgtttagattctgtc
atggtgatggggaattcacacctggtgatgaacaggaccaacaaattagccattattgcc
agccactgccaagagagccattttctgtaccccagcaagcactggaaggctggggatgca
gctggagatgatgcagtgtcttccagcagggatggcaagtatgaggtcctggctgtcacc
aatgatcaaatttctgaagaagtcaggaacctaatggccaggactgaagtaaagggccac
cagactgacactctattggctggatcccttgccaaagcactttgctatatccatcgagtc
tcaaaggagttggaagctgggcaagaaatgaaatcaagaatattgttctttgaacaggtt
attaaggctgctgaagactgtgccttgcagtacatgaattttatgaacgtgatctttgct
gctcagaagaacagcattgtaattgacgcctgtgttttggccactgactcgggtcttctg
cagcaagcctgtgacattacagggggcttgtacctgaagattccccagaaatctgctcta
gctcagtatttgctgtgggtgttcctgccagatgccaaccagcgttcccagttggtcctg
ccacctccagttcatgtggactacagggctgcctgtttctgtcaccgcaacctcatagag
ataggctatgtttgctccgtgtgtttgtcgatattctgcaatttcagcccgatctgcaca
acatgcgagactgccttcaaaattccactgcctcagatggtgaagccaaaaaagaaaaag
ctcaagccagcaacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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