KEGG   Scleropages formosus (Asian bonytongue): 108938890
Entry
108938890         CDS       T04919                                 
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04510  Focal adhesion
sfm04512  ECM-receptor interaction
sfm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108938890 (col9a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108938890 (col9a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108938890 (col9a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sfm00535]
    108938890 (col9a2)
Proteoglycans [BR:sfm00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   108938890 (col9a2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108938890
NCBI-ProteinID: XP_029104115
Position
23:1978943..1995387
AA seq 690 aa
MEGHLVVLKTLVLLQMASLTLAQVTGPPGPQGPPGPPGPPGTPGSDGIDGDKGPPGPPGP
VGMKGESGEPGPDGPPGDNGIDGLIGVKGDRGPAGNPGPKGQPGPLGRAGPPGPGLPGLP
GPPGPMGLPGEMGKTGIKGMMGPTGPPGLPGPPGKPGRPGEYTGEEGSADFQCPTNCPAG
PKGPQGLQGIKGHKGRPGALGDSGSPGKEGPKGDVGISGEQGIPGPPGPQGLRGYPGMAG
PKGEIGPRGYKGMPGPVGLPGLPGEEGPRGPPGDSGDKGDMGARGIRGPQGGIGKKGENG
LPGIDGKDGTPGIPGIKGAPGQPGRPGPPGHQGAAGLTGSPGTKGGPGQKGEPGPRGVTG
MAGVPGPQGEPGPPGEPGMEGVPGLKGDRGQRGPVGPVGLTGQVGSKGERGPMGIPGPQG
IPGTKGDKGFQGKVGWKGDLGDPGVEGLPGEKGEKGVSGEPGPKGQQGVRGDLGYNGPTG
DPGNPGDKGPPGLPGPRGLSGERGVPGMPGRQGAPGRDASDQHIIEVVLKMIQERLAQVA
VSAKRAVLGGTGVMGPPGPPGPPGPPGPHGSHGLPGTRGIPGIIGAPGQIGNTGHKGKRG
LKGERGDPGRPHPGPLGPPGIPGPSGIDGVARDGKPGERGPQGIAGEPGRPGKPGPPGLP
GFCEAAACLAASAYTSPRLQEAGTIKGPSK
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggagggacaccttgtcgtcctcaagacccttgtccttctgcagatggcatcccttacc
ctggctcaagtgaccggcccgccaggcccccaaggtccccccggcccccctggaccccca
ggcactcccggctccgacggcattgatggagacaaaggacctccaggcccccctggtcca
gtgggaatgaagggggaatcaggtgaaccgggcccagacggacccccgggggacaatgga
attgatggactgatcggtgtgaagggagacaggggtcctgctggaaatcctggaccaaag
ggtcagccagggcctttaggaagagctggaccaccaggacctggacttcctggactacct
ggacctccaggtccaatgggcctcccaggtgagatgggaaagacaggcatcaaggggatg
atgggaccgactggacccccaggattaccaggacccccagggaaaccaggtcgtccagga
gaatacaccggagaggagggtagtgctgacttccagtgtcccaccaactgtccagcggga
ccaaagggcccccagggcttgcagggaatcaagggacataagggtcgtcctggagcgcta
ggagattctggcagtccagggaaggagggacctaaaggagatgtgggaatctcaggagag
caaggaatcccaggacctccaggtccccagggcttgaggggttaccctggtatggctggg
cccaaaggagagataggtccacgtgggtacaaggggatgccaggaccagtcggcctccca
ggactcccgggtgaagagggaccccgggggccaccaggtgattcgggggacaagggagac
atgggtgcacgcggcataagggggccccaggggggtattggaaaaaaaggagagaatggc
ctacctgggatcgatggaaaagatggaacacctggaattcctggaatcaagggagctcca
ggacagcctgggagacctggacctccaggccaccagggggcagcaggtttgactggaagc
cctggaaccaaaggaggacctggacaaaagggtgagccagggcccaggggtgtgacaggg
atggctggagtcccaggacctcagggagagcccgggcctcctggggaacccgggatggag
ggagtcccgggtctgaagggggacaggggacagagagggccggttggaccagtaggcctc
actggtcaagtgggcagcaagggggagcgagggcccatgggcatccctggaccacagggc
atccccggaactaaaggagacaagggcttccaaggaaaagtgggctggaagggagacctt
ggtgatccaggtgtggaaggcctgcctggtgagaaaggagagaagggtgtgtctggggag
cctggacctaaaggacagcaaggcgtgaggggtgacctcgggtacaacggccctaccgga
gatcctggcaaccctggagacaagggaccacctggacttccgggcccacggggtctcagt
ggagagagaggagtgccaggcatgccagggaggcagggagcccccggccgggatgcctcg
gaccagcacatcatcgaggtggtgctcaagatgatacaagaacggctggcccaagtggct
gtgagcgccaagagggcagttcttggtggaactggtgtcatgggcccacctggtccccct
ggaccaccaggaccccctggtccccacggttctcacggtctccctgggactcgaggtatc
cctggaatcatcggtgcaccgggacagattggcaacaccggacacaaaggaaagaggggc
ctgaagggtgagcgaggggacccaggccgcccccaccccggcccgctcggacctcctgga
atcccaggtccctcaggcattgatggtgtggcccgggacgggaagcctggtgaaagggga
ccccagggtatcgccggagaaccaggtcgtcctggcaaaccgggtcctccggggctccct
gggttctgtgaggctgcggcctgcctggcagcatctgcgtacacctcaccacgcctgcag
gaggccggcaccatcaaaggaccctctaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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