KEGG   Serratia fonticola: Z042_11510Help
Entry
Z042_11510        CDS       T02987                                 

Definition
5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sfo  Serratia fonticola
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sfo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Z042_11510
Enzymes [BR:sfo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Z042_11510
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Z042_11510
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
Position
complement(2542977..2543786)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGQNIQYAVVRNARLRWPVSEQILTLSDQPVRSVQRRAKYLL
IELDGGWIIVHLGMSGSLRMLREDTEAGKHDHVDLVMSNGMILRYTDPRRFGAWLWCEDL
ATSNVLAHLGPEPLGEAFNGNYLYEKSRNKRTLIKPWLMDNTLVVGVGNIYASESLFTAK
ILPDRQANSLSQAEAELLVATIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRVCGTLLESAKHGQRSTFFCRGCQH
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagtcgaaaccagccgccgtggcatcgaaccttatcttgttggc
cagaatatccagtacgcagtggtgcgtaatgctcgcctacgctggccagtctctgaacaa
atcctgacattgagcgatcagccagtacgtagcgtacagcgccgtgccaagtatttgttg
atcgagctggatggtggctggattatcgtgcatttggggatgtctggcagtttacgaatg
ctgagggaagacactgaggcaggcaagcacgatcatgtcgatctggtgatgagcaacggt
atgatcctgcgctataccgatcctcgccgttttggtgcctggttgtggtgcgaagatctg
gcaacgagcaatgtattggctcatctcggcccagagccgctgggcgaggcattcaatggc
aactatctatatgaaaaatcgcgtaataaacgcacgctgataaaaccttggctgatggat
aacacgctggtagtgggggtggggaatatttatgccagtgaatcactgttcaccgccaaa
atcttgccggatcgtcaggcgaactcattgagtcaggcagaggcagagctactggtggca
accatcaaggcggttttgctgcgttcgatcgaacaggggggcacaacgctgcgtgatttt
ctgcaatcagatggtaaaccaggttattttgcgcaggaattgcaggtttatggccgggca
ggggaaccttgccgcgtgtgtggaacactgctcgaaagcgccaagcacgggcagcgcagc
acctttttctgccgcggctgccagcattga

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