KEGG   Shewanella frigidimarina: Sfri_0012Help
Entry
Sfri_0012         CDS       S.frigidimarina                        
Gene name fadA
Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Orthology K00632  acetyl-CoA acyltransferase [EC:2.3.1.16]
Pathway sfr00071  Fatty acid metabolism
sfr00280  Valine, leucine and isoleucine degradation
sfr00281  Geraniol degradation
sfr00362  Benzoate degradation via hydroxylation
sfr00592  alpha-Linolenic acid metabolism
sfr01100  Metabolic pathways
Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:sfr00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:sfr00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:sfr00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:sfr00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:sfr00281]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: Thiolase_N Thiolase_C ketoacyl-synt ACP_syn_III
PROSITE: AA_TRNA_LIGASE_I THIOLASE_1 THIOLASE_2 THIOLASE_3
Motif
Other DBs NCBI-GI: 114561200
NCBI-GeneID: 4277695
JGI: Sfri0012
UniProt: Q08A40
Position complement(15577..16740) Genome map
AA seq 387 aa AA seqDB search
MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALMVRNPQLDPNDIEDVIWGCVQQ
TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDALHQAARAIMTGQGDTFIIGGVEH
MGHVPMNHGVDFHPGLANRVAKASGMMGLTAEMLGKMHGITREQQDAFAVRSHQRAHAAT
IEGRFAKEIWGIEGHDANGALIKVMTDEVIRPETTLESLAGLRPAFDPVNGTVTAGTSSA
LSDGASAMLVMEESKARALGLTIRARIRSMAVAGCDAAIMGYGPVPATKKALARAGLSVA
DLDLIELNEAFAAQSLPCVKDLGLQDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM
EEKDATLGLATMCIGLGQGIATVFERV
NT seq 1164 nt NT seq  +upstreamnt  +downstreamnt
atgaaacaagctgttatcgtagactgcattcgcaccccaatgggccgttctaaggctggg
gtatttagaaatgtacgtgcagaaacattgtctgcagaactaatgaaagcactaatggtg
cgcaacccacaattagacccaaacgacattgaagatgttatttggggttgtgtgcaacaa
actctagagcaaggctttaacattgcccgtaatgcatcattgttagctggtattcctaaa
acggctggcgcagtaacggtaaaccgtttatgtggttcgtcaatggacgcccttcatcaa
gcggctcgcgccattatgactggccaaggtgataccttcattattggtggtgttgagcac
atgggtcatgtaccaatgaaccacggtgttgattttcacccaggccttgccaaccgtgta
gctaaagcatctggcatgatgggcttaactgctgaaatgttaggtaaaatgcacggtatc
actcgtgagcaacaagatgcgtttgctgtacgttctcaccaacgtgcccatgctgcaact
atcgaaggtcgctttgctaaagaaatttggggcattgaaggccacgatgccaacggcgca
ctaattaaagtgatgaccgacgaagtcattcgtccagaaacgacactagagtcacttgcg
ggtttacgcccagcattcgacccagttaacggcacggtgactgcaggtacatcatctgca
ttatctgacggtgcttctgcaatgttagtgatggaagaatctaaagcacgtgctttaggc
ttaactatccgagcacgtattcgttcaatggctgttgccggttgtgatgctgcaattatg
ggttatggtccagtacctgccaccaaaaaagcattagcacgcgcgggcttgtcggttgcc
gatttagaccttatcgaattaaacgaagcgtttgctgcacagtcattaccttgtgttaaa
gatcttggcttgcaagatgttgtcgatgaaaagattaacctgaacggtggcgcaattgca
ttgggccacccactaggttgttctggcgcacgtatatcgacaacactgatcaacttgatg
gaagaaaaagatgcaacgcttggtcttgccaccatgtgtatcggtttaggtcaaggtatc
gcaactgtattcgaacgcgtttaa
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