KEGG   Shewanella frigidimarina: Sfri_0013Help
Entry
Sfri_0013         CDS       T00395                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
sfr  Shewanella frigidimarina
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:sfr00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Sfri_0013 (fadB)
   01212 Fatty acid metabolism
    Sfri_0013 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Sfri_0013 (fadB)
   00650 Butanoate metabolism
    Sfri_0013 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Sfri_0013 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Sfri_0013 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Sfri_0013 (fadB)
   00310 Lysine degradation
    Sfri_0013 (fadB)
   00380 Tryptophan metabolism
    Sfri_0013 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Sfri_0013 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Sfri_0013 (fadB)
   00281 Geraniol degradation
    Sfri_0013 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Sfri_0013 (fadB)
Enzymes [BR:sfr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Sfri_0013 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Sfri_0013 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Sfri_0013 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Sfri_0013 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(16763..18913)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETIASLDAALDSIKQNTNIKALLLTSA
KSTFIVGADITEFLTLFQQDDATLLAWVEQANAVFNKLEDLPFPTASAINGFALGGGCET
ILATDLRVADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTAKDQRPEDALK
VGAIDAVVAPENLEAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLEAMMSFATAKGMV
FSVAGKHYPAPMAAVNVVEQAAGLDRDGALKVEALAFIKLAKTDVAQALIGIFLNDQFVK
GKAKKAGKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
TTQVARGRSTPEKMAKVLNNITPSLDYAAIKNSDIVVEAVVEHPKVKATVLAEVEGYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNTKGFYAYSVDRRGKP
KKDIDPTSYELLSAEFGELKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagccctaccattcaggttgagttacttgaagataatattgccaaactg
tgttttaacgcacaaggttcggtaaataaattcgacagagaaacaatagcctctcttgat
gccgccctagacagcatcaaacaaaataccaatattaaagccttgctgctgacatcagca
aaaagcacctttattgttggcgcagacattaccgaattcttaacgctatttcagcaagac
gatgccacgttgctagcttgggttgaacaagccaacgcagtattcaataagctagaagac
ttaccgtttccgacagcatcagcgattaacggttttgcgttaggcggtggttgcgaaacc
attttagcgactgacttacgcgttgctgataccaatgctcgcatcggtttaccagaaacc
aaattaggtcttattcctggttttggtggcactgtgcgtttacctcgagtaatcggtgca
gataatgcacttgagtggattaccacagctaaagaccaacgcccagaagatgcgttaaaa
gtaggcgctattgatgccgttgttgcaccagaaaacctagaagctgctgcgattcaaatg
ttgcatgatgcccttaatggtagccttgattggcaagctcgtcgcaccaaaaagcaatca
ccattacagttaccaaaacttgaagccatgatgtcttttgctaccgcaaaaggaatggtg
ttttctgttgcaggcaagcattatccagcgccaatggccgctgtgaatgttgttgaacaa
gctgcaggtttggaccgtgatggagcattaaaagtagaagcgctggcgttcattaaatta
gctaaaacagatgtcgcacaagcgctaattggtattttcttaaatgaccagttcgttaaa
ggtaaagcaaagaaagccggtaaactcgctaaagatgttaaccaagcagcagtattgggt
gcaggtattatgggcggcggcattgcttaccaaagcgccagcaaaggcacaccaattgta
atgaaagacattgctcagccagcattagagttaggcttgaacgaagcggctaaaattctg
acaacacaagttgcgcgcggtcgctctacgccagagaaaatggctaaagtattaaacaac
atcacgccttcactagattatgccgctatcaaaaatagcgatatcgttgtagaagcggtt
gttgaacatccaaaagttaaggctactgtactagcagaagttgaaggttacgtatcagaa
gatgccattattgcatcaaatacctcgactatctcaatcaacttactggctaaaagcctt
aagaaacctgaacgtttctgcggtatgcacttctttaaccctgtgcacaaaatgccatta
gttgaaattatccgtggtgagcacagctctgaagaaaccatcgcaacggtagtggcttac
gccagcaaaatgggtaaaactccaatcgtagtcaatgattgccccggcttctttgttaac
cgcgtattgttcccatactttgcaggcttcagtggtctacttgctgaaggtgctgacttt
gctgccgttgataaagtcatggaaaaacagttcggttggccaatgggcccagcttactta
cttgacgtagtcggtttagatactggtcaccacgcccaagcagttatggctgaaggcttc
ccagatcgcatgggtaaaaatggcaaagacgctatcgacattatgtttgaaaacaaacgt
ctaggtcagaaaaacactaaaggtttctatgcctattctgttgaccgtcgtggtaagccg
aagaaagacattgatccaacaagctatgaattattaagcgctgagttcggtgaattaaag
gcattcgagtctgatgacatcatcgctcgctgtatgatcccgatgatcatcgaaacggtt
cgttgtttagaagaaggcattattgcatcacctgctgaaggcgatatgggtctagtttac
ggtattggtttccctccattccgtggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatacgcacatcttggtggcttatatcaggttacc
gatgcaatgcgtgcacttgcagccaacaatggtagttactaccaagcctaa

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