KEGG   Shewanella frigidimarina: Sfri_0356
Entry
Sfri_0356         CDS       T00395                                 
Name
(GenBank) ATP-dependent DNA helicase RecG
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sfri_0356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfr03400]
    Sfri_0356
Enzymes [BR:sfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sfri_0356
DNA repair and recombination proteins [BR:sfr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Sfri_0356
SSDB
Motif
Pfam: DEAD Helicase_C RecG_wedge RecG_dom3_C ResIII tRNA_anti-codon SecA_DEAD AAA_30 SNF2-rel_dom Hus1 nSTAND3 Antimicrobial_2 SLFN-g3_helicase IMS_HHH ERCC3_RAD25_C PhoH IstB_IS21 Cdd1 BrxC_BrxD Zot
Other DBs
NCBI-ProteinID: ABI70219
UniProt: Q088U6
Position
complement(383480..385597)
AA seq 705 aa
MVFTSLTINLGEHNLLRLDLVPITDLKGVAKKVAEKLAKLGIKTVQDVLFHLPLRYEDRT
QIHPIAALPPGSFGTIEAEIQSTQIMQGRRRMLVCNVHDHSGMMSLRFFNFSMAQRNAME
NGASIRAYGEIRRGNHHKEIVHPEYQIIHPGESVTLSDTLTPIYPTTEGVKQASWIKLTE
QALAMLDQGGLPELLPSALQPNNISLRDALHILHRPHSSVSPFELEQGQHPAQQRLIQEE
LLAHNLSMLQLRQRSNQDAAVPMPATGQLLSPFLAQLPFKPTGAQQRVVAEINQDLQHPT
PMMRLVQGDVGSGKTLVAALAALQAIENGYQVAMMAPTELLAEQHAANFATWFEPLGLKV
GWLAGKLKGKARIQSLEDIASGAAQMVIGTHAIFQQAVVFNKLALIIIDEQHRFGVHQRL
GLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIADTRR
EQVIERVKQAALHDNRQAYWVCTLIEESEVLECQAAEDTAAELTIALPELKIGLIHGRMK
SAEKQTIMAQFKAGELNLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRG
AVASHCVLLYKAPLSQTATKRLGVLRNSNDGFVIAQKDLEIRGPGEVLGTKQTGLADLKI
ADLIRDQHLIAPTQKLASHVYQQVPQNVDAIIQRWIGDRQQYVQA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggtttttacatctttaacaatcaatttaggtgagcacaatttgctacgactggatctt
gttccgatcaccgaccttaaaggcgttgctaaaaaggttgcggaaaaactggctaagtta
ggtattaaaacagtacaagacgtactgtttcatttaccgctgcgttatgaagaccgtacg
caaatccatcctattgccgcattacctcctggcagttttggcaccatcgaagcagaaatt
cagtcgactcaaatcatgcaaggtcggcggcgcatgttagtgtgtaatgtgcacgatcac
agcggaatgatgagcctgcgattttttaatttttctatggcacaacgtaacgccatggaa
aatggagccagcattcgggcttacggtgaaatacgccgcggcaatcatcataaagaaatt
gttcacccggaatatcaaattattcatcctggtgaatccgtcacattaagcgacacgctg
acgcctatttacccgacaacagaaggggtaaaacaagccagttggataaaattgaccgag
caagccttggcaatgttagaccaaggtggattacccgagttacttcccagtgcattacaa
ccaaacaatattagcctgcgtgatgcgctgcatattttgcaccgtccccatagctcggtg
tctccttttgaattagagcaaggtcaacaccctgcacagcaaagattaatccaagaagaa
ctgctggctcataatttgagcatgttgcaactgcgccagcgcagtaatcaagatgccgca
gtgccaatgcctgctacaggacaattgttaagcccttttttagcgcaactgccctttaag
ccaacgggagcacaacaaagagttgtcgccgaaatcaaccaagatcttcagcatccaacc
cccatgatgcgtttagttcaaggcgacgtaggttcaggtaaaaccttggtggcggcactg
gcggcattacaagcaattgaaaacggttaccaagtagccatgatggcccctactgaatta
ttggctgaacagcacgcagctaattttgctacttggtttgaaccacttgggctaaaagtc
ggctggctggctggtaaactaaaaggcaaagcgcgaattcaatcactcgaagatatcgct
tctggcgcagcacaaatggtcattggtactcatgcgatatttcaacaggcggtagtgttt
aacaagctggctttaatcattattgacgaacaacatcgttttggcgttcatcaacgctta
gggttacgagaaaaaggcgtcagccaaggttttcatccacaccagttaatcatgacagcc
actcctatcccacgaactttagccatgacagcttatgccgatttagacacctctgtcatt
gacgagcttcctccaggacgtacaccggtcacaacggttgcgattgccgatacccgtcgt
gagcaagttattgagcgagttaaacaagcagctttacatgataatcgccaagcttattgg
gtatgtaccttaattgaagaatctgaggtgcttgaatgccaagctgctgaagacacagca
gcagaactcaccatagcactacccgagctcaaaattggcttaatccatgggcgaatgaaa
agtgctgaaaaacagacgattatggcgcaatttaaagcgggagagttgaacttattagtc
gcgactaccgtcatagaagtcggtgtagacgtacccaatgccagtttaatgataatcgaa
aaccctgaacgattaggccttgcacagttgcaccaattaagaggccgagtcggccgaggt
gctgttgcgagccattgtgtattactttataaagcgccattgtcacaaactgccacaaaa
cgtttaggtgtgctgcgcaacagcaatgatggctttgtaattgctcagaaagacttagaa
attagaggaccaggcgaagtgcttggcaccaagcaaaccggtttggcagatcttaaaatc
gctgatcttatccgtgatcaacatttaattgcaccaacccaaaaattggcatcacacgtt
taccagcaagtgcctcaaaacgtagatgctatcattcaacgctggataggtgatagacag
caatatgtccaagcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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