KEGG   Shewanella frigidimarina: Sfri_0779
Entry
Sfri_0779         CDS       T00395                                 
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfr03400]
    Sfri_0779
Enzymes [BR:sfr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Sfri_0779
DNA repair and recombination proteins [BR:sfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Sfri_0779
 Prokaryotic type
    Sfri_0779
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Bac_GDH_CD
Other DBs
NCBI-ProteinID: ABI70635
UniProt: Q087D0
Position
complement(913721..915235)
AA seq 504 aa
MPDTIKQAINIVWFKRDLRLSDHQPLVDAFNHDLPCLLIYTFEPFMLADSHYNERHWRFV
WQSLQDMNQQLLRFNGQVYMFSMPMIDLLDEISQTFEIKNIYSHQEIGLHNSFERDKTVA
RWCNQQPVSWQQSPTGAVVRGRKNRQAWDQHWQQVMNSPIAIPNWQQCQLQKLDNYQEPT
LDNAIMAHNDQFQIGGPKAARTILSSFLTHRGKDYQRSISSPSLSRTHCSRLSPYLAWGN
ISLKQVYQATLTRYNEVQTSNKAWRKPLLAMMSRLHWHCHFMQKFESQCSMEFTPVNPGY
VDYPYRTDDKVQQDIQRWADGQTGIPIIDACMRCLKETGYINFRMRAMLVSFVTHHLNIA
WQHASLPLANYFLDFEPGIHYPQLQMQASVTGINTIRLYNPVKQSQDQDPRGEFIRLWCP
ELTNLPNEYIHQPWQQPPMEAIFNDIILGRDYPEPMIDLTQASQTARDRLWSYREQPQVK
QHIVAVLTRHVRPKPKQKKARHDT
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgcccgacacaatcaaacaagctattaatattgtctggtttaaacgcgacttgcgcttg
tctgatcatcagccgctcgtcgatgcgtttaatcacgatttaccctgcttgctcatttat
acctttgagccatttatgctggctgactcgcattataatgaacgccattggcgctttgtg
tggcagtcgctgcaagatatgaatcaacaactgctccgatttaacggacaggtgtatatg
ttcagtatgccgatgattgacttactggatgagatatcccaaacatttgaaattaagaat
atttatagtcatcaagagataggtttacacaacagctttgaacgcgataaaacggttgct
cgctggtgtaatcaacagccagttagttggcagcagtcgcctactggagctgtagttcgt
ggccgaaaaaatcgtcaggcatgggatcaacactggcaacaagtaatgaacagccctatt
gccatccccaactggcaacaatgtcagttacaaaaactcgataactatcaagagccgact
cttgataatgccatcatggcacacaatgatcagtttcaaataggtggccccaaagcagcc
agaacaatactgagcagttttttaacccatcggggtaaagactatcaacgcagtatttca
agcccgagcttaagtcggacccattgttcacgcttatcgccttatttagcatggggaaac
atcagtctaaagcaagtatatcaagcgacattaacacgttataacgaggtgcaaaccagc
aacaaagcgtggagaaaaccgttattggcgatgatgtctcgtttacattggcattgccat
tttatgcaaaaatttgaaagccaatgcagcatggaatttaccccggttaaccctgggtat
gttgattacccctaccgtaccgacgacaaagtgcagcaagatattcaacgctgggctgac
ggccaaacggggatccctattatcgatgcctgtatgcgttgtttaaaagaaaccggctat
atcaactttagaatgcgcgccatgctagtcagctttgtgactcaccatctcaatatagcc
tggcagcatgccagcttaccgctagccaattattttctcgatttcgaacccggcatccat
tatccgcaactgcaaatgcaagcctcggtcacaggtattaacaccataaggttatataac
cccgtaaagcagtcacaagaccaagacccacgcggtgagtttattcgattgtggtgccca
gagctcaccaatttacccaatgagtatattcatcaaccttggcaacaaccgcctatggaa
gcgatttttaacgacattatcttaggtcgtgactatccagagccaatgattgatttaact
caagcatcacaaactgcccgcgatcgtttatggtcgtatcgcgaacaacctcaagttaaa
cagcatattgttgcggtattaacccgtcatgtacgcccaaagcccaaacagaagaaggct
cgccatgacacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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